| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3924 |
|---|
| Symbol | |
|---|
| ID | 7086687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4675025 |
|---|
| End bp | 4676389 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462801 |
|---|
| Product | sodium:neurotransmitter symporter |
|---|
| Protein accession | YP_002359822 |
|---|
| Protein GI | 217975071 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCGG CCAATACAAG TTCGACTAAC CACTTCAGCT CACGCTTAGG TTTTATCATG
GCGGCAGCCG GTAGCGCCGT TGGTGTAGGT AACATTTGGG GATTCCCCAC CCAAGCAGCC
ACCCATGGCG GAGGAGCCTT TTTGCTGGTT TACCTGGTAC TGATTTTCAT CCTAGGCATT
CCCATGTTAA TGGCCGAACT CATGATAGGC CGCCACGGAC AGACCAATCC CGCCGATGCC
ATGGGCAAAC TCGGCTTCAA CACCCTAACT CGCAGTTTAG GCAAGGCGAT AGGTTTGATT
TCCATCGTCA CTGCGGGATT AATCTATACC TTCTACAGCA TTCTTTCTGG CTGGTTTGTC
AGCTACGCCA TCGCCCCGAT TGCCACAGCT TTAGGCTCGA ACGACACCGC CGCTTGGTTA
GTGGATTTCT CGCTATCGCG CAATCTGGTG TTCACGCTGA TCTTCAGCAC ACTCGTGTTT
CTGGTATTGC TGCAAGGCGT ACAAGAAGGC ATAGAAAAAT GGTCGAAACG CTTGATGCCG
TTATTGTTGA TCATGCTGAT CGCGGGCGTG GCGTATATCT TCACTCTTAA TGGCGCGAGC
GAAGGCATTA CCGCACTATT AACGCCTAAC TTTACTAAGG CACTGGCGCC AGATACCTTG
ATCAGCGCGC TCGGACAAAC CTTCTTCTCC CTCACCATAG GCACAGGTGC CATGATGGTT
TATGGCAGCT ATTTGAGCCA AAAAGAGAAT ATCGCCAAGC TGACCGTCTG GGTTGCCTTT
ACCGATAGTG GCATCGCCTT TCTCGCCGCT TTCTTGATTA TCCCAGCCAT GTATGTGGCC
CAGCACAATG GCGTGGAGAT TTTTAACGCC GAGGGCAAAT TACTCGACTC AGATGCGCTG
GTGTTTACTG TTTTACCCGC CTTATTTTCG ACCTTAGGAG ACACCGCCAA CCTCATTATC
AGCGTGGTGT TCTTTATTCT GCTGATCATC GCCGGCCTAA CTTCTGCCAT TTCTATCGCC
GAAGTCCCGA CTAGCTATGT GATGCAGAAA TTCGGACTCA GCCGCCCGCG CGCCACCTTG
ATCATCGGCC TATTACTGAC CTCATTATCC CTATTACTGG CGGTATTTTT TGAGACGTTA
TTTAGCTTCA CTATTATGCT CACCACCCAA ATCGCCCAGC CGCTGGTCGC ACTCGGCATT
GCGATTTACT TAGGTTGGAT TTGGCGCCAA ACACAATTAC TCAAGGTGAT TCGTGGACAA
GATGGTGTTA ATACCACAGG ACTCTTATGG CGCATTTGGC CAAGGTACGT GAAGTATGTG
TGCCCAGTAC TGATCATCGC GATTGCCATC AGGCAATTTG TGTAA
|
|---|
| Protein sequence | MQSANTSSTN HFSSRLGFIM AAAGSAVGVG NIWGFPTQAA THGGGAFLLV YLVLIFILGI
PMLMAELMIG RHGQTNPADA MGKLGFNTLT RSLGKAIGLI SIVTAGLIYT FYSILSGWFV
SYAIAPIATA LGSNDTAAWL VDFSLSRNLV FTLIFSTLVF LVLLQGVQEG IEKWSKRLMP
LLLIMLIAGV AYIFTLNGAS EGITALLTPN FTKALAPDTL ISALGQTFFS LTIGTGAMMV
YGSYLSQKEN IAKLTVWVAF TDSGIAFLAA FLIIPAMYVA QHNGVEIFNA EGKLLDSDAL
VFTVLPALFS TLGDTANLII SVVFFILLII AGLTSAISIA EVPTSYVMQK FGLSRPRATL
IIGLLLTSLS LLLAVFFETL FSFTIMLTTQ IAQPLVALGI AIYLGWIWRQ TQLLKVIRGQ
DGVNTTGLLW RIWPRYVKYV CPVLIIAIAI RQFV
|
|---|
| |