| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3913 |
|---|
| Symbol | |
|---|
| ID | 7086676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4665308 |
|---|
| End bp | 4667320 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643462790 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_002359811 |
|---|
| Protein GI | 217975060 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA ATCCCGCCCA AAACGATGCT GTTCATTATG TTTCAGGCCC TTGCCTAGTA
TTGGCGGGTG CGGGCAGTGG TAAGACGCGC GTAATTATCA ATAAAATCGG TTACCTGGTC
GAAAAATGCG GCTATAAGGC ACGCAATATT GCGGCGGTGA CCTTCACCAA CAAGGCTGCC
CGTGAGATGA AAGAGCGGGT CGCTCAGTCC ATGGGACGCA AAGAGGCCAG AGGCCTGTGG
ATTTCAACCT TCCACACCTT AGGGCTTGAA ATCATTAAGC GTGAGCATAA GGTCTTAGGT
TTAAAGCCGG GATTTTCGCT GTTTGATGAT CAAGATACCT TGGCACTGCT CAAAGAGTTA
ACCCAAGACG AATTAGATGA AGATAAAGAT TTACTCAAAG CGCTCGCCAG TACGATTTCA
AACTGGAAGG GCGGCTTAAT TATTCCCGAG CATGCGCGCA AAATCGCTAA AGATGAGCAG
CAGCATTTAT TTGCCATGTT GTATCAGCGT TATGCCCAGC ACATGAAAGC CTATAACGCC
TTAGATTTTG ACGATTTAAT CCTGATGCCA ACCTTATTGT TGCGGCATCA TGAAGAAGTG
CGTACCCGCT GGCAAACCAA GATTCAATAC TTGCTGGTGG ATGAATATCA AGATACCAAT
ACCAGCCAAT ATGAAATGGT AAAGCTGTTA GTGGGTGATC GGGCGCGCTT TACCGTAGTG
GGTGACGACG ATCAGTCCAT CTATTCATGG CGCGGTGCTA AACCACAAAA CTTAGTGTTA
TTGGGTACGG ATTTTCCGCA GCTTAAGCTA ATTAAGCTTG AGCAGAATTA CCGTTCTAGC
CAAAGGATCC TACGGGCTGC CAACATTCTT ATCGCGAACA ATCCCCATGT TTACGATAAA
GCGCTCTTTA GTGAGCTTGC CTATGGGGAG CCGCTGCGGG TGCTATTTGC CGCCAACGAG
GAGCAAGAGG CTGAACGTGT GGTCGCGGAA ATAGTGCGAC ACAAGTTTGT TGGCCGTACT
CAGTTTGGCG ACTATGCGAT TCTGTATCGC GGCAACCATC AATCGCGGTT ACTCGAGCGC
GCGCTGATGA CGAACCGCAT TCCTTACAAA TTGAGTGGTG GCACGTCATT CTTCGCCCGT
GCTGAAATCA AAGACATCAT GGGCTATCTA AAGCTGGTGG TGAATCCCGA TGATGATAAT
GCTTTCCTGC GCATCGTTAA TTTGCCTAAA CGTGGCATAG GCCCATCGAC CTTAGAGCGC
TTAGGTAATT TCGCTAATGA GAAGCATATT TCTATGTTTG CGGCGATTTT TGAGCCTGAA
CTCAATCATC ATTTGCCGCC GGCGGCCATG TCATCCCTGT ATCAATTTGG TCGTTTCATT
GTCGAGACCG GGGATCATGC AGAGCGTGGT GAACCTGTCG AGGCTGTGAA GCATTTGATC
CGTAAGATCA ATTATGAAGA TTATCTATAC GAAACCAGCA CGAGTGCCAA AGCCGCTGAA
ATGCGGATGA AGAATATCTC TGAGCTTTAT CGTTGGGTAA CTGAGATGCT CGCGGGTGAT
GAATTAGATG AGCCAATGAC CTTGCCTGAG GTTGTGACTC GACTGACGCT CAGAGACATG
ATGGAGCGCA ATAGCGAGGA TGAAGGCGGC GATCAGGTGC AGTTGATGAC CTTGCATGCT
TCTAAGGGCT TAGAGTTCCC GTTTGTGTTT ATGGTGGGAG TGGAGGAGCG GATCTTGCCC
CATCAAACCA GCATAGATGA AGACAATGTC GATGAAGAGC GTCGCTTAGC CTACGTGGGC
ATCACTCGGG CTCAACGTGA ACTGTGGTTT ACCCTCTGTC GTGAAAGACG TCAATTTGGT
GAAACCATGC GTTGTGAGCC GAGCCGTTTC TTGCTTGAGT TACCTCAAGA TGATGTGGTG
TGGGAAAATC GTAAACCACA GCAAACGGAG CAGGAGCGGA TGCAGACAGG GCGAGCCAAT
ATTTCTAGCT TAAGGGATAT GTTTAAAAAA TAG
|
|---|
| Protein sequence | MKLNPAQNDA VHYVSGPCLV LAGAGSGKTR VIINKIGYLV EKCGYKARNI AAVTFTNKAA
REMKERVAQS MGRKEARGLW ISTFHTLGLE IIKREHKVLG LKPGFSLFDD QDTLALLKEL
TQDELDEDKD LLKALASTIS NWKGGLIIPE HARKIAKDEQ QHLFAMLYQR YAQHMKAYNA
LDFDDLILMP TLLLRHHEEV RTRWQTKIQY LLVDEYQDTN TSQYEMVKLL VGDRARFTVV
GDDDQSIYSW RGAKPQNLVL LGTDFPQLKL IKLEQNYRSS QRILRAANIL IANNPHVYDK
ALFSELAYGE PLRVLFAANE EQEAERVVAE IVRHKFVGRT QFGDYAILYR GNHQSRLLER
ALMTNRIPYK LSGGTSFFAR AEIKDIMGYL KLVVNPDDDN AFLRIVNLPK RGIGPSTLER
LGNFANEKHI SMFAAIFEPE LNHHLPPAAM SSLYQFGRFI VETGDHAERG EPVEAVKHLI
RKINYEDYLY ETSTSAKAAE MRMKNISELY RWVTEMLAGD ELDEPMTLPE VVTRLTLRDM
MERNSEDEGG DQVQLMTLHA SKGLEFPFVF MVGVEERILP HQTSIDEDNV DEERRLAYVG
ITRAQRELWF TLCRERRQFG ETMRCEPSRF LLELPQDDVV WENRKPQQTE QERMQTGRAN
ISSLRDMFKK
|
|---|
| |