| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3906 |
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| Symbol | |
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| ID | 7086669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4653040 |
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| End bp | 4655217 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643462783 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002359804 |
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| Protein GI | 217975053 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCTG CAGCTTCTGA AAAAATTGAC CAATGGACCA TTTCAGCCTC GCAAAGAGTC
TTAGTGGATC CGCTGCTGGA TTGTTTAGTG TTACTCACTG AGCATTTTGG CAACCCGTGC
TCGAGCGACT CGCTTGCGGC AGGTTTACCT TTGTCAGGTG CGGTATTAAC ACCCGATTTA
TTACCTCAGG CCGCGTCGAG GGCTGGCCTA GCGGCGAAGT TATCTCGAAA AGGCTTAAAC
GAAGTATCAC CTATATTGCT TCCCTGTATT TTGTTACTAA AAGACAAGAA AGCCTGCATA
TTGCGTGAAC TTGATGTTGA GTCCGATAAA GCGATTATTC AATTACCTGA GACGGGTGGT
GAAGAGACGC TGACAATTGA GTCGCTCGAA GCCTTATATG TGGGATATTT ATTCTTAGTT
AAACAAGAAT ACCGTGGTGA CATGGGCTTT GATGTTTATC TACACGATAA TAAAACCCAC
TGGCTAGTCC AAACCTTAAA AGATTCTGCG CCCATTTATC GCGATGCATT AATCGCTTCT
GTATTAGTGA ATTTGTTCGC CTTAGTTTCA CCTTTATTTA TTATGAACGT GTATGACAAA
GTCGTGCCCA ATCTTGCCTT TGAATCCCTG TGGGTGTTAG CGATTGGCGC TTCTATTGCT
TATCTGTTTG ATCTTGTCAT GCGGCAGCTC AGAAGCTACC TGATTGATGT AGCCGGTAAA
AAAGTGGACA TCATCGTCTC TTCTCGCCTA TTTGCTAAAG CGATTGGTAT CCCCTTAGAA
AAACGCTCCC CCAGTATTGG CGGTATGGCA AAACAATTAG GCGAATTCGA TAACATCCGT
GAAATTTTAA CCTCGGCGAC GATCACAACT TTAGTCGATC TGCCCTTTGC GGTATTTTTC
TTAATTATTA TCTACATCGT TGCTGGCGAT CTCGCGGTTG TCCCAGTGAT CGGTGGCGCC
ATCATTATTG GCTTTACACT TTATATCCAA CCTAAACTCA AAGCCGCTAT CGAAGAAGGC
AATAAATTTT CAAGCCTGAA ACATGGGCAT TTAATCGAGA GTTTATCGGC ACTAGAGTCA
ATCAAAGCCA ATGGTGCCGA AGGGATAGTA CAAAAAAGCT GGCAACAAAT GATAGGCCAC
AGTGCCAACT GGCAATTAAG GTCAAAAAAA CTCTCTAACT CAGTATCGAA CGTGGCTAAC
TTCACAGTGC AATTTACCGT TGTTTGTGTG GTGATTTTGG GCGTCTATCG CGTGGCCGAT
AATGCGATAT CGATGGGCGG AATTATTGCA GCCGTTATGT TATCGAGCCG TGCTATTTCA
CCTATGGCGC AGCTTGCAGG CCTGATGACC AGAGCAAATC ACACTGCCAG CGCACTGCGT
CAGCTTAATG AAATCATGAC TCAAGAAGAT GAGTTTGAAA ATAAAGGGCA TTTGGTTAGT
AAACAAAGGC TGATAGGTAA AATCAATGCT GATCATGTCG GTTTTGGTTA CCCTGGTTCA
GAAAAACCAG TACTTCATCC TATGTCACTG ACGATTAATC CCGGCGAGCG TATTGCGATT
ATTGGCCGCA ATGGTTCAGG TAAAAGTACC CTTGCCAAGC TATTGGTTGG ACTATTTCAA
CCTACAGCAG GAAGCTTGCG CTATGACGGT TTAGACTCGG CACAAATCCA TCCGAGTGAT
TTACGCCGTA ACTTTGGTTA TTTGCCCCAA GATGTCACCC TGTTCCACGG TTCGATTCGC
GACAATATTT TATTTGGTAC ACGCCAAGTC ACTGAACATC AGCTGATCCG TGCAGTACAA
CTTTCTGGAG TGAGTCAATT TACCAACCTA GAAGCAGAGG GGTTAGACCA ACAGGTCGGC
GAAGGCGGCA TGTCGCTCAG TCGCGGACAA AGACAGACCG TTGCCCTTGC TCGTGCCACA
CTCAATGACC CTCCAGTGCT ATTGATGGAT GAGCCCACCG CCAGCTTGGA TGCGCGCGCA
GAACAACAAT TTATTCGCTC AATGCAGAAT GTTAGCAAAG ACAGAACCTT GATTCTTATT
ACCCATAAGA TGCATCTACT GCAACTTGTT GACCGTATTA TCGTACTCGA ACGCGGTCAT
GTGGTCGCAG ATGGTCCCAA GGCAGAAGTG TTAGAAAAAC TCAATTTTGG CCTCGTGAAT
GGAGAAGCTA AAAGATGA
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| Protein sequence | MSAAASEKID QWTISASQRV LVDPLLDCLV LLTEHFGNPC SSDSLAAGLP LSGAVLTPDL
LPQAASRAGL AAKLSRKGLN EVSPILLPCI LLLKDKKACI LRELDVESDK AIIQLPETGG
EETLTIESLE ALYVGYLFLV KQEYRGDMGF DVYLHDNKTH WLVQTLKDSA PIYRDALIAS
VLVNLFALVS PLFIMNVYDK VVPNLAFESL WVLAIGASIA YLFDLVMRQL RSYLIDVAGK
KVDIIVSSRL FAKAIGIPLE KRSPSIGGMA KQLGEFDNIR EILTSATITT LVDLPFAVFF
LIIIYIVAGD LAVVPVIGGA IIIGFTLYIQ PKLKAAIEEG NKFSSLKHGH LIESLSALES
IKANGAEGIV QKSWQQMIGH SANWQLRSKK LSNSVSNVAN FTVQFTVVCV VILGVYRVAD
NAISMGGIIA AVMLSSRAIS PMAQLAGLMT RANHTASALR QLNEIMTQED EFENKGHLVS
KQRLIGKINA DHVGFGYPGS EKPVLHPMSL TINPGERIAI IGRNGSGKST LAKLLVGLFQ
PTAGSLRYDG LDSAQIHPSD LRRNFGYLPQ DVTLFHGSIR DNILFGTRQV TEHQLIRAVQ
LSGVSQFTNL EAEGLDQQVG EGGMSLSRGQ RQTVALARAT LNDPPVLLMD EPTASLDARA
EQQFIRSMQN VSKDRTLILI THKMHLLQLV DRIIVLERGH VVADGPKAEV LEKLNFGLVN
GEAKR
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