Gene Sbal223_3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3903 
Symbol 
ID7086666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4629831 
End bp4631012 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content49% 
IMG OID643462780 
Productprotein of unknown function DUF513 hemX 
Protein accessionYP_002359801 
Protein GI217975050 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACA ACAAGCACGA CGCAAAGAGC CCAGAATCAG AGGCTACCGC TATTATTGTG 
TCACCGGAAA CGACCGATGA TACGCCCGCA ACATCAGCGT CATCCACCGA ATCCCAAACA
GCCAAAGCCA CCCCTTCAAC CGCGCCGAGC CAAACGCCAG CATCCAGTAG AAGCTCGTGG
GCGATTCGCT TTGGGGTTTT ATTAGCGCTG GGGTTAACCG CTTGCACCCT TGGCGGCGGT
TTTATGCTGT ACCAACAAAT GCAACAGCAA CTACTGGCGC AGGATGCGAA AAATATCGCC
CTGCAGGACC AATTACAGCA AGCGCTGTTG CAGCCAAATC AACGTATTGG CCAGCTTGAA
CAGCAACAAC TGAATGATGC TAAGACTTAT CAAGAATTAA CAAAATTGGC AGAAGACCAA
AATCAACTGC AGGACAGGGT CAATAAACTG GCCCAGCGCA GCCCAACGCA TTGGATGGCC
TCTGAAGCCG AATATCTAGT GAATATGGCG GGCCGTAAAC TTTGGTTAGA GAAAGATCCC
CGCACCGCCA CCGATCTATT AAAGTCGGCG GATGAAACCA TCGCCGCCAT GAACAATCCG
GCGTTACTGC CTATTCGTAA GGCATTAGCA AAAGACATCG CCGCCACGGC CAGCATTAAA
ACCACAGATA TTGATGGCAA TGTATTGGCG CTCGATGCCT TAATTGAACA ACTCGATAAA
CTGCCGCTGA ATCGCACCGA TGCAGAAACT GATGCCCCAG AAGATACGAC GATTACTGGG
GATTTGAATG ATTGGCAGAG CAATCTGGGC AAAACGTGGA AAGCGTTAAC CCAAGACTTT
ATTACCATAC GCCACAAAAC CGCCGATGCG CCCGCTTTAC TCGCACCAGA ACAGCAATGG
TATCTGGTGG AGAACATTCG CCATAAACTG CTGCAATCGC AACTTGCGTT ATATCGCTAT
GACAGAGCGG CTTATCACCA ATCATTGATG ATGGCGCGCA AATGGCTCCA AACCTATTTT
GATACGCAAG ATCACAAGAC AGCTGAGGCC ATCGCCGAAA TCGATAAATT AGCGACCTTA
GAACTTGATC CTATTACCCT GAAATCCTTT GCGGCTAAAC CTCTGTTATT ACAGCTGACT
AGTTATGGCG AGCTGACCTC ATCAGAGGAT ACGCCACTAT GA
 
Protein sequence
MDNNKHDAKS PESEATAIIV SPETTDDTPA TSASSTESQT AKATPSTAPS QTPASSRSSW 
AIRFGVLLAL GLTACTLGGG FMLYQQMQQQ LLAQDAKNIA LQDQLQQALL QPNQRIGQLE
QQQLNDAKTY QELTKLAEDQ NQLQDRVNKL AQRSPTHWMA SEAEYLVNMA GRKLWLEKDP
RTATDLLKSA DETIAAMNNP ALLPIRKALA KDIAATASIK TTDIDGNVLA LDALIEQLDK
LPLNRTDAET DAPEDTTITG DLNDWQSNLG KTWKALTQDF ITIRHKTADA PALLAPEQQW
YLVENIRHKL LQSQLALYRY DRAAYHQSLM MARKWLQTYF DTQDHKTAEA IAEIDKLATL
ELDPITLKSF AAKPLLLQLT SYGELTSSED TPL