Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3902 |
Symbol | |
ID | 7086665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4629030 |
End bp | 4629770 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643462779 |
Product | Uroporphyrinogen III synthase HEM4 |
Protein accession | YP_002359800 |
Protein GI | 217975049 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCT TACTGACGCG CCCCGAGGGG CGCAATCAGT CCATGGTAGA TGCCTTGAAT GAACGAGGCA TTGCTCACTG GGTCACACCT CTGCTGTGTG TCGAAGCAAC GCCCGCTATC GCAACGAATA CCCCGCATCC TTTGGCACAC GCCGATATGG TTATCTGCAT CAGCGCCAAT GCAGTGACTT TTGCGGATAA CGCCTTAACT ACTACAAATC CACCCCATAA AGCTTGGCCT CCAGCTCAGT ACTTCGCCGT GGGGCATGCG ACTTGGAAAG CATTAGACCA ACTCGGTATT TCTGCCCTCG AAGCCCCAGA TGATTGCCAG CAGACCGAAG GGCTACTCAC GCTCGCGCCG CTGCAAGAGA TTAAAGGTAA GCAGATTACT ATTATACGTG GTGTCGGTGG CCGTGAAGCC TTAGCCGAAC AACTGGCTGC GCGCGGTGCA CATTTGCGCT ATTGGGAAGT GTATCAACGA GCTTGCCCGC CACTCGATGG TCAACAGTTA GCTCTGCAAT GGCAAGCCTT CGGGATAGAC ACTATTGTGG TGACCAGCGG TGAAGTACTG GATAACCTGA TTAATTTAGT GCCAAAAGAG TTATTTGCAT GGCTGCGCTC ATGTCATATC ATAGTCCCAA GTAACCGAGT AGAAGCTCAA GCTCACGCCT TTGGTATAAC CCAAGTCACC AATGCCAATG CCGCCAACAG CAAAGCCGTG CTAAACGCCC TTAAACTCTA A
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Protein sequence | MKVLLTRPEG RNQSMVDALN ERGIAHWVTP LLCVEATPAI ATNTPHPLAH ADMVICISAN AVTFADNALT TTNPPHKAWP PAQYFAVGHA TWKALDQLGI SALEAPDDCQ QTEGLLTLAP LQEIKGKQIT IIRGVGGREA LAEQLAARGA HLRYWEVYQR ACPPLDGQQL ALQWQAFGID TIVVTSGEVL DNLINLVPKE LFAWLRSCHI IVPSNRVEAQ AHAFGITQVT NANAANSKAV LNALKL
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