Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3897 |
Symbol | |
ID | 7086660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4623485 |
End bp | 4624729 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462774 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002359795 |
Protein GI | 217975044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.024639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATCACT TTCTCTACCA ACAAAATGCC CTGCACGCCG AAGGCTGCCA GGTTGCCGAT TTAGCTCAAA CTTACGGCAC ACCGCTGTAT ATCTATTCCC GCGCCACGCT AGAGCGCCAT TGGCATGCTT TTAATAATGC TGTGGCAGAT CATCCACATT TGATTTGTTA CGCAGTTAAA GCCAATGCGA ACTTGGCTGT ACTGAATGTG CTGGCACGTT TAGGCAGTGG TTTTGATATT GTGTCGGGCG GTGAGTTAGC AAGAGTGATG GAAGCGGGCG GCGATCCCGC TAAAGTGGTG TTCTCTGGCG TAGGTAAAAC TGCGGCCGAA ATGGAACAGG CACTTAATCT GGGCATTTAT TGCTTTAACG TTGAATCGAG TGCTGAACTT GAGCAGTTAA ATCTGGTCGC AGGTCGTTTA GGTAAAGTCG CGCCTGTGTC CCTGCGGATT AATCCCGATG TTGATGCGGG AACCCATCCC TACATTTCGA CTGGCCTTAA AGAAAACAAA TTCGGTATTG CTATGGATGA GGCTGAAATC GTTTTCGCCC GTGCCCATGC GTTGCCACAT TTAAAAGTGA AAGGTGTCGA TTGCCATATC GGCTCACAAC TGACTGAAAT CAAACCATTC CTCGATGCGA TGGATCGTAT GCTCGCCTTG ATCGACCGTT TGGCCGAGCA GGGTATCGTT ATTGAGCATT TCGATGTGGG TGGTGGTTTA GGGGTGACCT ATGATGCCGA AACGCCGCCA CATCCTGATG TGTATGCTGC CGCCATATTG GCGCGTTTGG GCGACCGTCA ACTGAAGCTG ATCTTCGAAC CGGGCCGTGC GATTGCCGCC AATGCGGGGA TTTTTGTTAC TCAGGTGCTG TATCTTAAAG AAAACAGCGA CAAACGTTTT GCGATTGTCG ATGGTGCGAT GAATGACTTG ATTCGTCCCG CACTCTACAG TGCATGGCAA AATATTATCC CAGTCGTGCC AAGGGACTCA GAGGCCTATG AGTTTGATAT TGTTGGCCCA GTGTGCGAAA CCGGTGACTT TTTAGGTAAA AATCGCCAGC TCGCGTTAGC CGCGGGTGAT TTACTGGCGG TGCGTTCGAG TGGTGCCTAT GGTTTTGCCA TGGCCTCTAA CTACAACACG CGTCCTCGTG CGGCTGAAGT GATGGTGGAT GGTGAGCAGG CTTTCTTAGT GCGTGAGCGA GAAAAATTGT CTCAGCTCTG GCAAGGTGAG CAACTCCTGC CGTAA
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Protein sequence | MDHFLYQQNA LHAEGCQVAD LAQTYGTPLY IYSRATLERH WHAFNNAVAD HPHLICYAVK ANANLAVLNV LARLGSGFDI VSGGELARVM EAGGDPAKVV FSGVGKTAAE MEQALNLGIY CFNVESSAEL EQLNLVAGRL GKVAPVSLRI NPDVDAGTHP YISTGLKENK FGIAMDEAEI VFARAHALPH LKVKGVDCHI GSQLTEIKPF LDAMDRMLAL IDRLAEQGIV IEHFDVGGGL GVTYDAETPP HPDVYAAAIL ARLGDRQLKL IFEPGRAIAA NAGIFVTQVL YLKENSDKRF AIVDGAMNDL IRPALYSAWQ NIIPVVPRDS EAYEFDIVGP VCETGDFLGK NRQLALAAGD LLAVRSSGAY GFAMASNYNT RPRAAEVMVD GEQAFLVRER EKLSQLWQGE QLLP
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