| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3893 |
|---|
| Symbol | |
|---|
| ID | 7086656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4620246 |
|---|
| End bp | 4620977 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462770 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
|---|
| Protein accession | YP_002359791 |
|---|
| Protein GI | 217975040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0104241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGCT ATCTTAGACC TCAAAATATT CAAGCGATCA GTTTCGATCT CGACGATACC
CTGTACGACA ATCTACCGCA TATTTTAAAT GCCGAAGCCG AGCTGGCGAC GTTTCTGTTG
CAGACTTATC CATTGTCGCA GGCGTGGCAA ACCCATGATT GGCGTAGGTT AAAACTGCAA
CTGCTGCAGC AAAATCGCGA GCTGGCCCAC GATACTAGCG CAGCCCGTTT GGCAACGCTT
CGCCAAGGGC TAATACAGCT AGGGTATTCG GCCGTCGAAG CCGAACGCGG CGCCGAGCAA
GGATTGGCGT GTTTTTATTT TCATCGCAGC CATTTTCAAG TATCTGACGA AGTGCTCTTG
TTACTCAAAC GCCTATCGCA GCATTTTAGA TTAATCGGCA TCACCAATGG CAATGTGGAT
GCCGAGCGAA TTGGTTTAGG CGATGCCTTC GAGTTTGTGT TGCATCCAGG CAATGGCGTG
CATATGAAAC CCGCCAAAGA CATGTTCGAA TTGGCCTGCT CGCGATTAAA TATTGCACCG
CAGCATTTAC TGCATGTTGG CGACAGTATG AATGCCGACG TTCGTGGTGC GCGGTTGGCT
GGGTGCCAGT CTGTGTGGTT GAATCCGAGT TTTGGCCGAG TCGATTCCTT ACCTATTGCG
GCCTTGTTAC CCCATTTAGA AATTAATGCT CTCGATGCGT TAATCAAAGT GCTGGCTATC
GACGCAAACT AA
|
|---|
| Protein sequence | MRCYLRPQNI QAISFDLDDT LYDNLPHILN AEAELATFLL QTYPLSQAWQ THDWRRLKLQ
LLQQNRELAH DTSAARLATL RQGLIQLGYS AVEAERGAEQ GLACFYFHRS HFQVSDEVLL
LLKRLSQHFR LIGITNGNVD AERIGLGDAF EFVLHPGNGV HMKPAKDMFE LACSRLNIAP
QHLLHVGDSM NADVRGARLA GCQSVWLNPS FGRVDSLPIA ALLPHLEINA LDALIKVLAI
DAN
|
|---|
| |