Gene Sbal223_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3892 
Symbol 
ID7086655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4619544 
End bp4620122 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content52% 
IMG OID643462769 
ProductHupE/UreJ protein 
Protein accessionYP_002359790 
Protein GI217975039 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00430028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCGTA TCGGGTTGTT ATTACTGCTT ACTTTATGTT GGATCGCGCC GGTATCGGCC 
CATGAGATCC ATTCGGGTGG CGGTTTCATG TCAGGTTTTA ATCATCCGGT TTTGGGATTT
GATCACTTGC TGGCAATGTT GAGTGTGGGC ATGTTGAGCA CCCAGCTCGG TGGCCGCGCA
ATTTGGACTG TCCCCTTAGC ATTTGTCACC TTTATGTTAG TGGGCGGGAT TTTAGGCTTA
TACGCCATTG CCGTTCCCTT CGTTGAAATC GGCATTGCCC TCTCGGTATT GTTACTCGGC
CTCGCCATCG CTTTTGATCG TCAAATTCCA CTGTTATTCG CCATGGCATT TGTTGGCGTA
TTTGCGATTT TCCACGGGCA TGCCCACGGC GCCGAAATGC CAGCATTGGC AAGCCCGGTT
TTGTATGCCC TAGGATTTTT ATTTGGCACT GCGGTCATCC ATTTAGGCGG CGTAATGATA
GGCCTTGGAA TGCAGCGGAT GACTGGGCAG CGGAACCTCA TGCGTGTCAC GGGCGCAGCG
ATTGCGGCCA TGGGCGGTTA TTTATTAGCA GGATTTTGA
 
Protein sequence
MARIGLLLLL TLCWIAPVSA HEIHSGGGFM SGFNHPVLGF DHLLAMLSVG MLSTQLGGRA 
IWTVPLAFVT FMLVGGILGL YAIAVPFVEI GIALSVLLLG LAIAFDRQIP LLFAMAFVGV
FAIFHGHAHG AEMPALASPV LYALGFLFGT AVIHLGGVMI GLGMQRMTGQ RNLMRVTGAA
IAAMGGYLLA GF