| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3883 |
|---|
| Symbol | |
|---|
| ID | 7086646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4608105 |
|---|
| End bp | 4610111 |
|---|
| Gene Length | 2007 bp |
|---|
| Protein Length | 668 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643462760 |
|---|
| Product | fumarate reductase flavoprotein subunit |
|---|
| Protein accession | YP_002359781 |
|---|
| Protein GI | 217975030 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000869864 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTGA TTTATACCGA TTCATTAGTG GTAGGCGCCG GACTTGCAGG CTTAAGGGTC
GCCATCGCCT CCAAAGAGCG GGGGCTCGAT ACCTTAGTCC TGTCACTCAT TCCTGCGAAA
CGCTCCCACT CAGCTGCCGC CCAAGGCGGT ATGCAGGCGA GCTTAGGCAA TGCCGTAAAA
GGCATGGGCG ATGATGAAGA TGTGCATTTT CAAGATACGG TAAAAGGTTC CGACTGGGGC
TGCGATCAAG ATGTGGCGCG GATGTTTGCT CACTGTGCGC CCAAGGCTGT GCGTGAATTA
GCGACGTGGG GCGTGCCTTG GTCAAGGGTG AGTGCAGGCC CAAGAGACGT GATTGTTAAC
GCGCAAAAAG TGACTTTGCA TGAGGCGCAG GAAGCCCATG GACTGATTAA CGCCCGTGAC
TTTGGCGGCA CAAAAAAATG GCGCACTTGC TACACGGCCG ATGGTACGGG TCATTCGCTG
TTATACGCTA TGGATAACAA AGCGATTTCT ATGGATATTC CCGTCCATGA ACGTATCGAA
GCGTTGGCAC TGATTCACGA TGGTAAACGT TGCCATGGTG TGATCGCCCG CTGTTTGATA
ACCGGTGAAC TCAGAGCCTA TGTGGCTAAG TCCACCACCA TTGCCACTGG CGGATATGGC
CGCATTTATG AAGTGTCGAC CAATGCGATT ATCTGCGAAG GCATTGGCCA AGCGTTGGCG
CTAGAAACGG GCGTGGCAAG GCTTGGCAAT ATGGAAGCGG TACAATTCCA TCCGACTGCT
ATCGTTCCCG TGGGCATTTT AACTACAGAA GGCTGCCGTG GTGATGGCGG CTTATTGCGT
GATAAAGATG GTTACCGCTT TATGCCAGAC TATGAGCCTG ATAAAAAAGA GTTGGCATCG
CGGGATGTGG TATCGCGCCG CATGACAGAA CACATACGTA AAGGTAAGGG CGTCGATAGC
CCTTATGGGC CGCATTTGTG GCTGGATATT ACCCTTCTGG GTCGCAAACA CATCGAAACT
AACCTTAGGG AAGTGCAGGA AATTTGTGAG AATTTCCTCG GTATCGACCC CGCTAAGGAT
TGGATCCCAG TTAGGCCAAC GCAGCATTAT TCCATGGGCG GCATTCGAAC CAATGCTACG
GGTGAAAGCC CGCAGCTTAA AGGCTTGTTC AGCGTAGGTG AGGCGGCGTG TTGGGACATG
CATGGCTTTA ACCGTTTAGG CGGTAATTCG CTGGCCGAGA CCGTGGTTGG TGGCATGATT
ATTGGTAAAT ATGTCGCCGA TTTTTGTGAG AAAAATAGCC TAGAGATAGA CACTCAGCTT
GCTGAACGGT TTATGCAGCA AGTGCAGAGT GAAATTGATC TGCTGATCGA GGGTGATGGT
CACGAGAGCG CCTTTGCCCT CAAACGCGAA ATGCAGCGCA TCATGATGGA TTATGTGGGG
ATTTTCCGTA ATGGCCCTGA GCTTGATAAA GCCGTCGCTG AACTTAAAGT GCTGCTCGAA
CGTTCGCGTA AACTTGGGCT CAAGTGTAAG AAACGTCACG CCAATCCTGA GCTGGTCGAA
GCCCTGCGGG TCAAGCGTAT GCTAAAAGTA GCGCTGACTG TGGCCTGCGG CGCAGCGGCA
CGAACCGAAA GTCGTGGTGC CCATGCTCGA GAAGATTATC CACAGCGCAA TGATCGCGAT
TGGCTAAATC GCACCTTAGC CAGTTGGCCC GATCCCGATG CGCTCGAACC TGTGCTTAAT
TACGAAGCGC TGGATGTGAT GAAGATGGAA CTCCCGCCGG GTTATCGTGG TTATGGCATT
AACAACGCCA TAGTGCATCC GGATACCGAA AAACGTGAGC AACAGATTGC CGAGATTTTA
GCTGAGTTAG GTGATGATGC GGACCGTTAT CAACGCCAGC TGGCGCTTAT GCCCTTTGAA
TTACCCGAAA GCTTACAACC TAATAATGAA CGTTTGAGTG ATACCTTAAA AAGCCCGTCC
GCCAATGCGT TAGGAGAAAA ATCATAA
|
|---|
| Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNAVK
GMGDDEDVHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL ATWGVPWSRV SAGPRDVIVN
AQKVTLHEAQ EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAMDNKAIS MDIPVHERIE
ALALIHDGKR CHGVIARCLI TGELRAYVAK STTIATGGYG RIYEVSTNAI ICEGIGQALA
LETGVARLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPDKKELAS
RDVVSRRMTE HIRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVQEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTNAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCE KNSLEIDTQL AERFMQQVQS EIDLLIEGDG HESAFALKRE MQRIMMDYVG
IFRNGPELDK AVAELKVLLE RSRKLGLKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA
RTESRGAHAR EDYPQRNDRD WLNRTLASWP DPDALEPVLN YEALDVMKME LPPGYRGYGI
NNAIVHPDTE KREQQIAEIL AELGDDADRY QRQLALMPFE LPESLQPNNE RLSDTLKSPS
ANALGEKS
|
|---|
| |