Gene Sbal223_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3880 
Symbol 
ID7090054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4606020 
End bp4607042 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content50% 
IMG OID643462757 
Productzinc-binding alcohol dehydrogenase family protein 
Protein accessionYP_002359778 
Protein GI217975027 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02817] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000115139 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCCA TTGGTTACCA AACTGCAGGT GCAATCACAG CACCCAATGC ATTAGAAGAC 
ATCACGTTAG CCGAACCGAC GGCAACAGGT TTTGACCTCT TGGTGGAAGT CAAAGCCATT
TCCGTCAATC CGGTCGACAC TAAAATCCGC GCATCCAGCT CGGCACCAGC GGGCGAATAT
AAGATCATCG GCTGGGATGC CGTCGGCGTC GTCAAAGCAG TTGGCGAAAA CGTCAGCCTT
TTCAACGTTG GTGATGAAGT GTGGTACGCG GGCGACATTA GCCGCAGCGG CAGTTATGCC
GAATATCAAC TGGTTGATGA GCGAATTGTC GGCCATAAAC CCAAAAGTTT AACCTATGCC
CAAGCGGCGG CATTACCCTT AACCGGAATT ACAGCATGGG AGATTCTATT CGACCGCTTA
GGTTTGCCCC AAGATGGTTC GGCAACTGAC GCCCGCATTT TAATTATCGG CGCGGCAGGT
GGCGTTGGCT CTATCATCAC TCAGCTGGCG GTAAAACTCA CAGGGGCAGA GGTGATTGGC
ACAGCTTCTC GCCCAGAATC CACCGCTTGG GTGCAAAAAC TCGGCGCCGA TGCGGTCATA
GACCACACCC AATCACTCTC GGGCGAACTT GCCAATATTG GCATTGCTGA TGTGACCCAT
GTGATTAGCT TGACCCAAAC CGATCAACAC TTCGATGAGA TCGTACAAGT GCTTAAGCCA
CAAGGGAAAC TGGCGTTAAT CGATGATCCT AAGGGGCCAT TAGATGTGAT GAAACTCAAG
CGTAAGAGCC TGTCACTGCA TTGGGAGCTG ATGTTTACCC GCAGCCTGTA TCAAACCGAA
GATATGATTG CGCAACACCA CTTACTCTAC CGCTTAAGCG CACTTATCGA TACGGGTGAA
TTGCAGAGTA CGTTCGGCGA GCACTACGGC ACAATTAATG CGCAGAACTT AATCAAGGCC
CACACTCTGA TTGAGTCAGG CAAAGCCATA GGTAAAATTG TTTTGGAAGG TTTTAACCAA
TGA
 
Protein sequence
MKAIGYQTAG AITAPNALED ITLAEPTATG FDLLVEVKAI SVNPVDTKIR ASSSAPAGEY 
KIIGWDAVGV VKAVGENVSL FNVGDEVWYA GDISRSGSYA EYQLVDERIV GHKPKSLTYA
QAAALPLTGI TAWEILFDRL GLPQDGSATD ARILIIGAAG GVGSIITQLA VKLTGAEVIG
TASRPESTAW VQKLGADAVI DHTQSLSGEL ANIGIADVTH VISLTQTDQH FDEIVQVLKP
QGKLALIDDP KGPLDVMKLK RKSLSLHWEL MFTRSLYQTE DMIAQHHLLY RLSALIDTGE
LQSTFGEHYG TINAQNLIKA HTLIESGKAI GKIVLEGFNQ