Gene Sbal223_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3879 
Symbol 
ID7088914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4604959 
End bp4605885 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID643462756 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002359777 
Protein GI217975026 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000318758 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGATTA ATGATTTAGC TTTGTTCGTG CGGGTCGCCG ATTGTGGCAA TATTTCTGCC 
GCTGCGGCCG AGATGGATAT CTCCGCCGCT TCTGCCAGTG CCGCAATAAA ACGGCTTGAA
AAACAGCTTG ATACTAGTTT ATTTATCCGC ACGACCCGCA GCTTACGTTT GACAGTACAA
GGTGAGCGTT ATCTTATTCA TTGTCGACGT GCTTTAAGCG ATTTAGCGCT CGGCGAACAG
GCTATCGCCA GTGACAAAGG TAAAATATCC GGCACCTTGA GCTTATCGGT CTCTTCGGAT
TTTGGCCGTA ATCTGTTTGT GCCTTGGCTC GATGAGTTCT TGCTCGATTT CCCACAATTG
CAAGTGCGCT TGCATTTTGG CGATAATATC AGCAGCTTTT ATCACGATAA AATTGATGTC
GCTGTGCGTT ACGGCAAACC GCAGGACTCA AACCAAGTGG CATTTCCGCT CTGCAGTGTT
GATCGTGTCT TGTGCGCCTC ACCTGAATAT CTGGCCGAGT TTGGTGTGCC AGATTCATTA
GAACTGCTGA TAGAGCATAA TTGCTTATTT TATAAGTTAG ATGAGCGAAC CCACGATCAA
TGGCAATTTA GGCGCGACGG CCAAGAATAT AAAGTGCGTG TCACGGGCAA CCGTAGTGCT
AACGATGCGG AAATAGCTCG TCGCTGGGCT GTGGCGGGTA AAGGATTGGT ATTTAAGTCG
AGTCTAGATC TGGCCGATGA CTTAATTTCA GGGCGGTTAG TACGATTGTT GCCTGAGTAT
CAAGGGGAGC CAGTCGATTT GTACTTAGTG TGCCCAGGAC GCGAGCATGT GACGCCTGTT
GTCTTGTTGC TGCGGGAAAT GCTGCGGCAG CGCACACAGG CTTTGAGTAA AAGCTTGGGT
CAAATACTGG CAGTAAAAAA ATCTTAG
 
Protein sequence
MLINDLALFV RVADCGNISA AAAEMDISAA SASAAIKRLE KQLDTSLFIR TTRSLRLTVQ 
GERYLIHCRR ALSDLALGEQ AIASDKGKIS GTLSLSVSSD FGRNLFVPWL DEFLLDFPQL
QVRLHFGDNI SSFYHDKIDV AVRYGKPQDS NQVAFPLCSV DRVLCASPEY LAEFGVPDSL
ELLIEHNCLF YKLDERTHDQ WQFRRDGQEY KVRVTGNRSA NDAEIARRWA VAGKGLVFKS
SLDLADDLIS GRLVRLLPEY QGEPVDLYLV CPGREHVTPV VLLLREMLRQ RTQALSKSLG
QILAVKKS