Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3879 |
Symbol | |
ID | 7088914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4604959 |
End bp | 4605885 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643462756 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002359777 |
Protein GI | 217975026 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000318758 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGATTA ATGATTTAGC TTTGTTCGTG CGGGTCGCCG ATTGTGGCAA TATTTCTGCC GCTGCGGCCG AGATGGATAT CTCCGCCGCT TCTGCCAGTG CCGCAATAAA ACGGCTTGAA AAACAGCTTG ATACTAGTTT ATTTATCCGC ACGACCCGCA GCTTACGTTT GACAGTACAA GGTGAGCGTT ATCTTATTCA TTGTCGACGT GCTTTAAGCG ATTTAGCGCT CGGCGAACAG GCTATCGCCA GTGACAAAGG TAAAATATCC GGCACCTTGA GCTTATCGGT CTCTTCGGAT TTTGGCCGTA ATCTGTTTGT GCCTTGGCTC GATGAGTTCT TGCTCGATTT CCCACAATTG CAAGTGCGCT TGCATTTTGG CGATAATATC AGCAGCTTTT ATCACGATAA AATTGATGTC GCTGTGCGTT ACGGCAAACC GCAGGACTCA AACCAAGTGG CATTTCCGCT CTGCAGTGTT GATCGTGTCT TGTGCGCCTC ACCTGAATAT CTGGCCGAGT TTGGTGTGCC AGATTCATTA GAACTGCTGA TAGAGCATAA TTGCTTATTT TATAAGTTAG ATGAGCGAAC CCACGATCAA TGGCAATTTA GGCGCGACGG CCAAGAATAT AAAGTGCGTG TCACGGGCAA CCGTAGTGCT AACGATGCGG AAATAGCTCG TCGCTGGGCT GTGGCGGGTA AAGGATTGGT ATTTAAGTCG AGTCTAGATC TGGCCGATGA CTTAATTTCA GGGCGGTTAG TACGATTGTT GCCTGAGTAT CAAGGGGAGC CAGTCGATTT GTACTTAGTG TGCCCAGGAC GCGAGCATGT GACGCCTGTT GTCTTGTTGC TGCGGGAAAT GCTGCGGCAG CGCACACAGG CTTTGAGTAA AAGCTTGGGT CAAATACTGG CAGTAAAAAA ATCTTAG
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Protein sequence | MLINDLALFV RVADCGNISA AAAEMDISAA SASAAIKRLE KQLDTSLFIR TTRSLRLTVQ GERYLIHCRR ALSDLALGEQ AIASDKGKIS GTLSLSVSSD FGRNLFVPWL DEFLLDFPQL QVRLHFGDNI SSFYHDKIDV AVRYGKPQDS NQVAFPLCSV DRVLCASPEY LAEFGVPDSL ELLIEHNCLF YKLDERTHDQ WQFRRDGQEY KVRVTGNRSA NDAEIARRWA VAGKGLVFKS SLDLADDLIS GRLVRLLPEY QGEPVDLYLV CPGREHVTPV VLLLREMLRQ RTQALSKSLG QILAVKKS
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