| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3878 |
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| Symbol | rho |
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| ID | 7088913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4603640 |
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| End bp | 4604905 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643462755 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_002359776 |
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| Protein GI | 217975025 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000128755 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTTAA CTGAATTAAA AGACACGCCG ATTTCTGACC TAGTCTCGCT AGCTGAAAAT
ATGAAGCTCG AAAATATGGC CCGCGCTCGC AAGCAGGACA TTATTTTCTC AATCCTTAAA
GCCCACGCAA AAAGTGGAGA AGACATTTTC GGTGGTGGGG TATTAGAAAT ACTCCAAGAC
GGTTTCGGCT TCTTACGCAG CTCAGACGGT TCTTATTTAG CTGGTCCAGA TGACATCTAT
GTCTCACCAA GCCAAATTCG CCGCTTTAAC ATGCGAACGG GTGATACCAT TTTTGGTAAA
ATTCGCCCAC CGAAAGAAGG CGAGCGTTAT TTTGCCCTAT TGAAAGTCAA CGAAGTTAAC
TTCGATAAAC CTGAAAACTC CCGTAATAAA ATCCTCTTTG AAAACTTAAC CCCACTCCAC
GCAGAAGAAC GTATGCGTAT GGAGCGCGGC AACGGCTCAA CTGAAGATAT TACCGCACGT
ATTCTGGATT TATGCTCACC GATTGGTAAA GGTCAACGTG GTTTGATCGT TGCACCACCA
AAAGCCGGTA AAACGCTATT ACTTCAAGGT ATTGCTCAGA GTATCAGCTA CAACAACCCA
GAAGTGGTGT TGATGGTATT GTTGATCGAC GAACGTCCAG AAGAAGTAAC CGAGATGCAA
CGCCTCGTTA AAGGTGAAGT AATTGCATCA ACCTTCGATG AGCCAGCCAG CCGTCACGTT
CAAGTTGCCG AAATGGTGAT TGAAAAAGCA AAACGCTTGG TTGAGCACAA AAAAGACGTG
GTTATCCTAC TCGACTCTAT TACTCGTCTA GCCCGTGCCT ATAACACTGT TATCCCGTCA
TCGGGCAAAG TGTTAACCGG TGGTGTGGAT GCGAACGCCC TGCACCGTCC AAAACGCTTC
TTCGGTGCGG CACGTAACAT CGAACACGGC GGCAGCTTGA CCATTATCGC CACTGCTTTG
GTTGATACCG GTTCTAAGAT GGACGAAGTG ATCTACGAAG AATTTAAAGG TACAGGTAAC
CAAGAGCTGC ATCTGTCACG TAAAGCGGCA GAAAAGCGTG TGTTCCCAGC CATTGATTTC
AACCGTAGTG GTACGCGTCG TGAAGAAAAA CTCACGACTC AAGAAGAACT GCAAAAAATG
TGGATCCTGC GTAAGATTTT AAATCCTATG GATGAAGTCA GCGCAATGGA ATTCTTAATC
GACAAATTGG CTATGACCAA GACTAACGAA GAATTCTTTA CCGCCATGAA ACGCGCTAAG
TCTTAA
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| Protein sequence | MNLTELKDTP ISDLVSLAEN MKLENMARAR KQDIIFSILK AHAKSGEDIF GGGVLEILQD
GFGFLRSSDG SYLAGPDDIY VSPSQIRRFN MRTGDTIFGK IRPPKEGERY FALLKVNEVN
FDKPENSRNK ILFENLTPLH AEERMRMERG NGSTEDITAR ILDLCSPIGK GQRGLIVAPP
KAGKTLLLQG IAQSISYNNP EVVLMVLLID ERPEEVTEMQ RLVKGEVIAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHRPKRF
FGAARNIEHG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTQEELQKM WILRKILNPM DEVSAMEFLI DKLAMTKTNE EFFTAMKRAK
S
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