Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3869 |
Symbol | |
ID | 7088904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4596488 |
End bp | 4597414 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643462746 |
Product | Prepilin peptidase |
Protein accession | YP_002359767 |
Protein GI | 217975016 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000036956 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAT TTATCTCCAT TTTAGGCCAG TCTCTAAACC AGAGTCCTTG GCTCTTTATT GCTTTAAGCT TTATTTTTGC CGCTACCATT GGTAGTTTTT TAAACGTGGT GATCCACAGA TTTCCTGTGA TGATGAAACG GGAGTGGCAG CAAGAATGTA ATCAGTATTT ACAGGAATAC CACGAAGACA TAGTCAAAAA AATAGGGATA GACCAACTCA ATAAACCTAT AGATGCCTTC CCTGAAAAGT ATAATCTTGT TGTTCCGGGC TCAGCCTGCC CTAAGTGCAA AACGGCGATT AAACCTTGGC ATAATTTACC CGTATTAGGC TGGTTAATGC TCAAGGGAAA ATGCGCCGCC TGTCACGCCC CTATTTCTGC TCGCTACCCT ATTATTGAAT TCATCACAGG GCTACTTATC GCGACTTTAG CTTGGCATTT TGGTCCAAGC TGGCAGTTTG TTTTTGCGAG CATACTCACC TTTGTGCTTG TAGCACTGAC AGGTATCGAT CTTGATGAGA TGTTGCTCCC CGACCAAATG ACGCTACCGT TGCTTTGGCT CGGCTTGATA ATCAATCTAA ATCATACCTT TGCGAGCCCA ACCGATGCCA TTATCGGCGC GGCGGCAGGC TATTTGAGTC TATGGTCCAT TTTCTGGTTG TTTAAAATCC TCACAGGTAA AGAAGGCATG GGTTATGGCG ACTTTAAATT ACTCGCCGTG TTCGGTGCTT GGCTTGGCTG GCAAATGCTG CCGCTGGTGA TTTTACTTTC GTCCCTCGTT GGCGCAGTCG TTGGCATCAC TATGATTGTC AGTAAACGTC TGAAACAAGG GAATCCAATC CCATTTGGCC CCTATATTGC TGCCGCAGGC TGGATAGCCT TGCTATTTGG ACAACAGATT GTCGATTGGT ATCTATCGAC ACTGTAA
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Protein sequence | MSEFISILGQ SLNQSPWLFI ALSFIFAATI GSFLNVVIHR FPVMMKREWQ QECNQYLQEY HEDIVKKIGI DQLNKPIDAF PEKYNLVVPG SACPKCKTAI KPWHNLPVLG WLMLKGKCAA CHAPISARYP IIEFITGLLI ATLAWHFGPS WQFVFASILT FVLVALTGID LDEMLLPDQM TLPLLWLGLI INLNHTFASP TDAIIGAAAG YLSLWSIFWL FKILTGKEGM GYGDFKLLAV FGAWLGWQML PLVILLSSLV GAVVGITMIV SKRLKQGNPI PFGPYIAAAG WIALLFGQQI VDWYLSTL
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