| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3868 |
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| Symbol | |
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| ID | 7088903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4595177 |
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| End bp | 4596448 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643462745 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002359766 |
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| Protein GI | 217975015 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000419174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTACGG CAACGACCAC AAGAAAGCCT CGCACCAAGA AAGCCGAGCA AAAAAGCCAA
TCCAAAATCT ATACTTTCGA ATGGAAAGGG GTTAATCGCG ACGGCAAGAA AACCGCAGGT
GAGCTCAGGG GCGCAACCGC AGCCGAAATC CGTAGCCAGT TAAAATCCCA AGGCGTTACC
CCAAAGAGTG TTCGTAAACA GTCCTCTGCG CTATTTAAGT TAAGTGATCC AAAAATCACC
CCTATGGATA TAGCTATGAT GACTCGCCAA GTTGCGACTA TGCTAGCGGC GGGCGTACCT
TTAGTGACAA CTATTGAGCT ACTTGGCCGC GGTCACGAAA AAGCTAAAAT GCGAGAACTA
TTAGGAAATA TCCTCAGCGA AATTCAATCA GGTATTCCCT TATCCGATGC TATGCGCCCC
CATAGGCGTT ACTTCGATGA ACTTTATGTT GACCTAGTTG CAGCAGGCGA GCACTCAGGC
TCACTGGATT TGGTTTTTGA TCGCGTAGCT ACCTACAGAG AAAAATCAGA AGCACTGAAA
TCAAAAATTA AGAAGGCTAT GTTCTACCCT GCTGCAGTTG TCATAGTCGC AATCTTAGTC
ACCTCATTAT TATTATTGTT TGTGGTGCCT CAATTTGAGG AGATTTTTAA GGGGTTTGGC
GCTGAGCTCC CCGCCTTTAC TCAATTAGTA CTGCATATTT CACGCGGCTT ACAATCCTCT
TGGTATATAT TTTTAGCAGC TATCGGCGGC GGAGTATTTT TGTTCGTTCG AGCCCACCGA
AACTCACAAA TGGTGAGAGA TCGAGTAGAC GAAGCTGTGC TTAAAATCCC AGCCATTGGG
CCTATTTTAC ACAAAGGTGC CATGGCTCGA TTCGCTCGTA CTTTAGCAAC CACTTTCGCC
GCCGGCGTGC CGTTGATTGA TGGTTTAGAA TCCGCAGCTG GCGCATCGGG TAATGCAGTC
TATCGAAAAG CGATTTTAAA AATTCGTCAA GAAGTCATGG CGGGGATGCA GATGAATGTG
GCTATGCAGA CCACTGGACT TTTCCCTGAC ATGTTAGTGC AAATGGTGAT GATAGGCGAA
GAATCAGGTT CACTAGATAA CATGCTCAAT AAAGTCTCTA CTATCTACGA AATGCAAGTA
GACGATGCCG TAGATGGCTT ATCAAGCCTG ATAGAACCGA TTATGATGGT GGTCATCGGC
ACTGTCGTCG GCGGTTTAAT TGTTGCTATG TACTTACCTA TCTTCCAGAT GGGTAAAGTT
GTTAGCGGCT AG
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| Protein sequence | MATATTTRKP RTKKAEQKSQ SKIYTFEWKG VNRDGKKTAG ELRGATAAEI RSQLKSQGVT
PKSVRKQSSA LFKLSDPKIT PMDIAMMTRQ VATMLAAGVP LVTTIELLGR GHEKAKMREL
LGNILSEIQS GIPLSDAMRP HRRYFDELYV DLVAAGEHSG SLDLVFDRVA TYREKSEALK
SKIKKAMFYP AAVVIVAILV TSLLLLFVVP QFEEIFKGFG AELPAFTQLV LHISRGLQSS
WYIFLAAIGG GVFLFVRAHR NSQMVRDRVD EAVLKIPAIG PILHKGAMAR FARTLATTFA
AGVPLIDGLE SAAGASGNAV YRKAILKIRQ EVMAGMQMNV AMQTTGLFPD MLVQMVMIGE
ESGSLDNMLN KVSTIYEMQV DDAVDGLSSL IEPIMMVVIG TVVGGLIVAM YLPIFQMGKV
VSG
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