| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3858 |
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| Symbol | |
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| ID | 7088893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4583517 |
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| End bp | 4584368 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643462737 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_002359758 |
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| Protein GI | 217975007 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000015429 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTAT TTTCACTCTT GGTCGCCATT TTAGTGGAGC GACTTAAATT TCTTCCTTCA
TCATGGCAAT TTGATCGTTT ATTGCAATCC TACCAAACGA CGTTTTTTGG TGATAAAGCT
TCACTGACGA GCGTTATGAT GGCGCTGGCG TTCGTGCTGC CAGCCCTGTT GGTGTATGTG
TTGTCTTGGT TAGTGGCGGG GATGTTTTGG GGCTTATTAA GTTTAGCGCT ATGGATTGTC
GTAGCGGTGG TTTGTTTTAA CCATCAGAAA CAGCGTGATA TTTTCAAAAA ATATATGCAA
GCGGCTTGTC GTTCTGACGT CCAAGCTTGT TACCATTATG CCGCTGAGCT CGATTGTAGC
GAGTGTTTGG ATGCGGTATC CGAGAAAGAC CTTGGCGCTA AAGTGGGTCA AAGTGTCGCT
TGGATTAACT ATCGTTATTA CGGCGCCGTT GCTTTGTTCT TCATTTTTCT GGGGCCAGTT
GGTGCTGTGT TGTATTGCAC AGTGCGTTTT TATGCCGAAG AAAATGCCCG TAAATCCCTT
GAACTGCCAT TAGTCAACGA AGTGATTAGC GTGTTGGATT GGTTACCTAG CCGCATCTTT
GCCTTTGGTT ATGCGTTAAG TGGCCAATTT AGCGAAGGGT TAGCCGCATG GCGCCATCAT
GGTTTGACCA TAAATACCAG TGCTCGCACT GTCGTTGTTG AGACGGCATT AGCAGCGCAA
CCTTTACCTG AGGTCGCAAG TGCACCTATA TGTGTACAGT CAACCTTAGC ATTATTAGTA
CTGAGTAAAC GCAACTTTAC ACTTATCGTC GCGGTACTAT CACTGCTGAC TATTTTTGGA
TTAGTGAGTT AA
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| Protein sequence | MALFSLLVAI LVERLKFLPS SWQFDRLLQS YQTTFFGDKA SLTSVMMALA FVLPALLVYV
LSWLVAGMFW GLLSLALWIV VAVVCFNHQK QRDIFKKYMQ AACRSDVQAC YHYAAELDCS
ECLDAVSEKD LGAKVGQSVA WINYRYYGAV ALFFIFLGPV GAVLYCTVRF YAEENARKSL
ELPLVNEVIS VLDWLPSRIF AFGYALSGQF SEGLAAWRHH GLTINTSART VVVETALAAQ
PLPEVASAPI CVQSTLALLV LSKRNFTLIV AVLSLLTIFG LVS
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