| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3857 |
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| Symbol | pdhR |
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| ID | 7088892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4582525 |
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| End bp | 4583277 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643462736 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_002359757 |
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| Protein GI | 217975006 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000012948 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTATA GTAAAATTAA TCAGCCAAAA ATTTCTGATG TGATCATGGC TCAATTAGAG
CAGATGATCT TAGAGGGCAG TTTGCAGCCC GGTCAGAAGT TACCGCCTGA ACGCGAACTG
GCGATCCAGT TTGAAGTGTC TCGACCTTCT TTGCGTGAAG CTATCCAAAA GCTTGAGGCA
AAAGGACTGT TAATGCGCCG CCAAGGCGGT GGTACTTATG TCAAAGAGCA ACTCTGGCAG
AGCCTTGCCG ATCCTATCGT TGAACTTATG AATTCTGATC CAGAGAGTCA ATACGACTTG
CTGGAGTTCC GTCATGCTAC CGAAGGCATG ATGGCTTATT TTGCGGCGCT GCGTGGTACT
GACGCCGATA TGCAAAATAT CAAACGTATG ATCCTCGAGG TGGAAGCCGC CACCGATATC
GAAAAACAAG CCGCCGCCAT TGTGCGCTTT TATCGTGCCG TTGCCGAAGC GTCACATAAC
GTGGCTATGT TACACCTCGT TCTCAGTTTA ACCCCTGTGC TGCATCAAAA TGTGGCGCAA
AACTTGGAGC TTTTAAGCCG CCGCGAAGAA GCTTCTACTA TGGCTAACGA TCACAGACGG
GCCTTGCTCG CTGCCATCGT TCGTCGTGAT CCCGAAGCCG CCAGAGAAGC CTCGAATGAA
CACTTAAGTT ACATCGAAGA GGTGATGTTA TCTGTGCGGG AAGAAGATAG CCGGTTGCAG
CGAAGCTTGC GCCGTTTAAA GAGTGGCGCT TAA
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| Protein sequence | MAYSKINQPK ISDVIMAQLE QMILEGSLQP GQKLPPEREL AIQFEVSRPS LREAIQKLEA
KGLLMRRQGG GTYVKEQLWQ SLADPIVELM NSDPESQYDL LEFRHATEGM MAYFAALRGT
DADMQNIKRM ILEVEAATDI EKQAAAIVRF YRAVAEASHN VAMLHLVLSL TPVLHQNVAQ
NLELLSRREE ASTMANDHRR ALLAAIVRRD PEAAREASNE HLSYIEEVML SVREEDSRLQ
RSLRRLKSGA
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