| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3836 |
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| Symbol | |
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| ID | 7088871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4545201 |
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| End bp | 4545902 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643462715 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002359736 |
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| Protein GI | 217974985 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCG ATAAATTCCT CTGTAAAAGC ACAGATCTTG ATCGTGATGC AGCAAGTGTC
GCCATTATTA ACGGCTCAGT CACAGTCAAT GGCGCTATCG CGACAGACTG CGCAATGCAA
GTGCATGAAA ATAATGCCGT CTGCCTGAAT GAAAAGCCGC TAATGCCACG TCCATCCCGC
TATTTCATGC TGCACAAACC CGCTGATACC TTATGTTCAA ATGTGGATGG CGCCTACCCT
TCGCTGTTTC ATCTACTCGA TATTGAGCGT GCATTTGACC TACACATCGT TGGTCGCTTA
GATGTCGATA CCACGGGCTT AGTGCTACTC ACAGACGATG GCCGCTGGTC ATTTAATATT
ATCTCGCCTC AATATCAGTG CAAAAAAGTC TATCGCGTAA CACTACGAGA TCCACTCGAC
AGCGAGGCGA CTGCAGCCAT AGCCGCAACG TTTGCCGCTG GGCTGCAATT ACAGGGCGAA
ACTGCCCTCA CTCTACCGGC AACACTGCAG CAAGTGGATG ACAAAACCGT GCTACTCACG
CTCACCGAAG GCAAGTTTCA TCAAGTCAAA AGGATGTTTG CCGCCGTGGG CAATAAAGTG
GTTGCTCTGC ACAGGGCACA AATTGGCGCA TTTATCTTAG ATGTGGACAT TGGAGAATGG
CGCGAGTTAA CCTTAGCCGA GATAGCCTCC TTCACAGCCT AA
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| Protein sequence | MRLDKFLCKS TDLDRDAASV AIINGSVTVN GAIATDCAMQ VHENNAVCLN EKPLMPRPSR
YFMLHKPADT LCSNVDGAYP SLFHLLDIER AFDLHIVGRL DVDTTGLVLL TDDGRWSFNI
ISPQYQCKKV YRVTLRDPLD SEATAAIAAT FAAGLQLQGE TALTLPATLQ QVDDKTVLLT
LTEGKFHQVK RMFAAVGNKV VALHRAQIGA FILDVDIGEW RELTLAEIAS FTA
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