| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3835 |
|---|
| Symbol | |
|---|
| ID | 7088870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4543701 |
|---|
| End bp | 4544867 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643462714 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002359735 |
|---|
| Protein GI | 217974984 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAAAA TTGCCTTAAC TCAGTCGGCT CAAAAGCCCA GTCTTTTCGT CCCCGTCGCA
GGGTTAAGTT TGTTTGCTTT GGCATCTGGC TACTTGATGA GCTTAATCCC ACTGTCACTC
ACTTTTTTCG AACTCAGCAC TTCACTTGCC CCATTACTTG CCAGTATTTT TTATTTAGGC
TTACTGCTGG GAGCGCCTTG TATTGCTCCC ATTGTTACCC GTATCGGTCA CAGTAAAGCC
TTTATCCTTT TTTTGAATAT CCTGCTTTGC AGCGTTGTCG CTATGATATT AATCCCCAAA
AGTGGCGTCT GGTTAGCTTC TCGACTCGTC GCGGGATTTG CGGTTGCAGG GATTTTTGTG
GTGGTTGAAT CATGGCTATT AATGGCCGAT ACCCAAAAGC AACGCGCTAA GCGGCTTGGG
CTTTACATGA CAGCGCTTTA TGGCGGTACT GCCATAGGAC AATTAGCCAT AGATTATTTA
GGTACAAAGG GCAATCTACC TTACCTAGTG GTTATGGGAT TATTAGCCGC AGCAAGTTTA
CCTGCGTTAT TGGTAAAACG CGGTCAACCT CAGGTAAGCG AACAACAGTC AATGTCATTG
TCTGCGCTAA AAAACCTAAG TCAGCCTGCC ATTATGGGAT GTTTAGTCTC TGGATTATTG
CTCGGCCCTA TCTATGGGTT ACTGCCTATT TATGTGGCAC TGGATATGGG GCTTGATCAG
CAAACAGGAC AATTTATGGC CCTCATCATA GTGGGTGGCA TGCTAGTACA GCCTTTAGTC
AGTTATTTAT CTCCTATATT TAACAAAAGT GGCTTGATAG TGAGCTTTAG CCTACTGGGC
GTCGCGGCAT TATTGCTACT CAGTCAGCAT TCAAGTATGA CGCTGATTAT TGGATTTCTA
TTACTTGGCG CCAGCGCTTT TGCCCTTTAC CCGATTGCAA TCAGTCTGGC TTGTGACAAC
TTGCCTGCTA GCCAAATGGT TTCAGTGGCG CAAGTGATGC TGCTGAGCTA TTCGGTGGGG
TCAGTGATAG GGCCATTAGT TGCCAGCAGC TTTGGCCAAA CGGAGTTCGG CTTACTCATT
TATTTAGGCA TATGCTGTAT TCTGAGCAGT ATTTACATTT TTGCTCAATT GCTTATTAAC
ACTAAGCCCA GTTTTTCCTC GCCTTAA
|
|---|
| Protein sequence | MEKIALTQSA QKPSLFVPVA GLSLFALASG YLMSLIPLSL TFFELSTSLA PLLASIFYLG
LLLGAPCIAP IVTRIGHSKA FILFLNILLC SVVAMILIPK SGVWLASRLV AGFAVAGIFV
VVESWLLMAD TQKQRAKRLG LYMTALYGGT AIGQLAIDYL GTKGNLPYLV VMGLLAAASL
PALLVKRGQP QVSEQQSMSL SALKNLSQPA IMGCLVSGLL LGPIYGLLPI YVALDMGLDQ
QTGQFMALII VGGMLVQPLV SYLSPIFNKS GLIVSFSLLG VAALLLLSQH SSMTLIIGFL
LLGASAFALY PIAISLACDN LPASQMVSVA QVMLLSYSVG SVIGPLVASS FGQTEFGLLI
YLGICCILSS IYIFAQLLIN TKPSFSSP
|
|---|
| |