| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3829 |
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| Symbol | |
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| ID | 7088864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4536958 |
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| End bp | 4538991 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643462708 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_002359729 |
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| Protein GI | 217974978 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC CCCAACAAGG TCTCAGCGCT AATACTGGCG ATTGGCCCAA GGCGCTGTTC
TATACCGCCT TAATTTTTTC TATTTTTCAA ATCATCACTG CCGCTTTTCA TCCCGTGTCG
ACGCAAGTGC TGCGTGCCAC CCATATTGGC TTTTTGCTGC TCGTGGTGTT TTTGAGTTAT
CCCGCCAGAG GTAAATCACA ACCTTGGCAA CCGCTCGCTT GGCTACTCGG TTTAGCAGGC
ATGGCAACAG CGGCTTATCA GTGGTATTTC GAAGCCGACT TAATTCAACG TTCTGGCGAG
CTGACCGATG CGGACATGGT GATAGGTATC ACTTTGATCG TATTGGTATT TGAAGCGGCG
CGCCGAGTCA TGGGCTGGGC ACTACCTATT ATCTGCGGCA TCTTTTTGGC CTATGGCTTA
TTGGGTCAAT ACCTACCCGG CGATTTGATG CACCGCGGCT ATGGCTTCGA TCAAATCATC
AACCAATTAG CCTTCGGCAC CGAAGGCTTG TACGGCACAC CAACCTATGT GTCGGCGACG
TATATTTTCC TGTTTATTCT TTTCGGTTCC TTTCTAGAAC AAGCCGGAAT GATCCGTTTA
TTTACCGACT TTGCCATGGG ATTGTTCGGC CACAAGCTTG GCGGCCCGGC TAAAGTCGCT
GTGGTCTCAT CGGCGCTGAT GGGAACGATT ACGGGCTCAG GAGTGGCCAA CGTCGTCACC
ACAGGGCAAT TTACCATTCC ATTGATGAAA CGATTTGGCT ATCGCTCCGC CTTCGCCGGT
GGCGTGGAAG CGACCTCAAG TATGGGCAGC CAGATCATGC CACCGATCAT GGGCGCCGTG
GCCTTTATCA TGGCCGAAAC CATTAACGTG CCCTTTATCG AGATAGCTAA AGCGGCATTG
ATCCCTGCAC TGCTTTATTT CTGCTCAGTA TTCTGGATGG TGCACTTAGA GGCCAAACGC
GCCAATCTTT GTGGCCTGCC CAAAGATCAA TGTCCCGATC CTTGGGCGGC GATTAAAGAA
CGTTGGTATC TCCTTATCCC CTTGTTTATT TTGGTCTACT TGCTGTTTTC GGGCAGAACG
CCGCTGTTCT CTGGCATGGT TGGTTTAGCC CTCACCTCGA TAGTGATCTT AGGCTCGGCC
ATCGTCCTGC GGTTGTCTTC AATGGCGATG CGGATTGCCT TTTGGATTGC CCTTGGGGTG
TTATGCGCGG GCTTCTTCCA ACTCGGGATC GGAGTCGTGT TTGGGGTTAT CGCCCTGCTA
GTCGCCATTT GTTGGTTTAT TAAGGGCGGC AAAGAAACCC TCACAGTTTG CTTACACGCG
CTGGTTGAAG GCGCGCGTCA TGCTGTGCCT GTGGGTATTG CCTGCGCCTT AGTGGGCGTG
ATTATCGGCA TAGTGTCACT CACAGGGATT GCTTCAACCT TCGCGAGCTA CATTCTCGCC
GTTGGCCAAG ACAACCTGTT CTTGTCACTC GTGTTGACTA TGATCACTTG CCTAGTGCTC
GGCATGGGGA TCCCGACGAT TCCTAACTAC ATTATTACCA GCTCAATAGC CGCACCCGCA
TTGCTCGACT TAGGTGTGCC GCTAATTGTG TCGCACATGT TTGTGTTCTA TTTCGGCATC
ATGGCCGATC TCACGCCGCC TGTTGCCTTG GCCTGCTTTG CCGCAGCGCC GATTGCGAAG
GAATCCGGAC TTAAGATCAG TCTCTGGGCG ATTCGGATCG CCATTGCAGG TTTTGTGATC
CCCTTTATGG CGGTTTACGA TCCAGCCTTG ATGCTCCAAG GTGATAGCTT ATTAGCGACG
GGCTTTGTGG TGCTGAAGGC AACGGTTGGT ATTGGTATTT GGGGCGTGAT CTTTACCGGA
TATCTACTAC AAAAACTCTA TTGGTGGGAA CGCGTTATCG GCTTCCTTGC GGGGGCAAGT
TTGATCCTTG CGACGCCATT GAGCGATGAA ATCGGCTTTG GACTCGCGCT GTTGTTTATC
GTGCAGCACA GTTGGCGCGC GCGCAAACTC AAACGTCTGG CAGAGCAAGG ATAA
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| Protein sequence | MSDPQQGLSA NTGDWPKALF YTALIFSIFQ IITAAFHPVS TQVLRATHIG FLLLVVFLSY
PARGKSQPWQ PLAWLLGLAG MATAAYQWYF EADLIQRSGE LTDADMVIGI TLIVLVFEAA
RRVMGWALPI ICGIFLAYGL LGQYLPGDLM HRGYGFDQII NQLAFGTEGL YGTPTYVSAT
YIFLFILFGS FLEQAGMIRL FTDFAMGLFG HKLGGPAKVA VVSSALMGTI TGSGVANVVT
TGQFTIPLMK RFGYRSAFAG GVEATSSMGS QIMPPIMGAV AFIMAETINV PFIEIAKAAL
IPALLYFCSV FWMVHLEAKR ANLCGLPKDQ CPDPWAAIKE RWYLLIPLFI LVYLLFSGRT
PLFSGMVGLA LTSIVILGSA IVLRLSSMAM RIAFWIALGV LCAGFFQLGI GVVFGVIALL
VAICWFIKGG KETLTVCLHA LVEGARHAVP VGIACALVGV IIGIVSLTGI ASTFASYILA
VGQDNLFLSL VLTMITCLVL GMGIPTIPNY IITSSIAAPA LLDLGVPLIV SHMFVFYFGI
MADLTPPVAL ACFAAAPIAK ESGLKISLWA IRIAIAGFVI PFMAVYDPAL MLQGDSLLAT
GFVVLKATVG IGIWGVIFTG YLLQKLYWWE RVIGFLAGAS LILATPLSDE IGFGLALLFI
VQHSWRARKL KRLAEQG
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