Gene Sbal223_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3816 
Symbol 
ID7088851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4523414 
End bp4524496 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content50% 
IMG OID643462695 
ProductTMAO reductase system periplasmic protein TorT 
Protein accessionYP_002359716 
Protein GI217974965 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR02955] TMAO reductase system periplasmic protein TorT 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTGA CTGCATTCTT CGCCCGTTCC CTCAGGATTT GCCTCCTCTT AATCCTTAGC 
TGTTTCGTCT TTGCAGTGCA GGCAGCTTGG TATCCCGCCG ATGTCATTGC CGACGGTCAA
AAGACCCTTT ACACGCCACT CACTAAGGCC AATCAAGCAT GGCGGATCTG CGCCTTACTT
CCCCACGGTA AAGATCAATA TTGGTGGGGC GTCGCCTTTG GATTATCACA AGAAGCCGAG
CGCCAAGGCG TAACGCTTGG CATTTATGAT GCTGGTGGAT ATGACAAGAT TGAGCAGCAA
AAACAGCAAC TTCATGATTG TTATGCACTC AAGGCTCAAG CTTATATTAT TGCCGCCAAT
ACCGCTGACG GACTGATTGC GGATATTGAA CAACTCAGCG CTGCGGGCAT TCCGGTTATC
GATTTAGTCA ATGGTATCGC GACCGACAAA CTCACGAGTC GCTCCTTAGT CAGCTTTGAA
GATATGTCCG TTGCGGCGAC AGAATATATT GCGGCGCAGC AGCGAGAAGC TATCAATCAG
GACTCACCTA AGCTTAAGGT GGCGTGGTTT CCTGGGCCTA AGGGCGCCTC TTGGGTAATG
GCGGCGGAAC AAGGGTTTAG ACGGGCGGCA GCTAAACAAG AGTTCGACAC AATTGAAGGC
GGTTACGGTA CGACTGAGTT ATTCGTTCAA GCGGATTTGG TGCGAAAAGT ACTTGCAAAA
CAAAGCGTAG ATTATGTAAT TGCCAATGCG GTGGCGGCCA CGTTCGCGGC GCGCTTTCTA
GATGGACGCC GGAATCAAAC CGGCAAAGTC ATCGCATTTT ACTCTAATGC GCAAACTATA
GAATTAGTGC AGAAAAAGCA GCTACTCGCG ACAGTCAGCG ACTCACCGGT ATTGCAGGCT
CGAATTGCCA TCGATCTCGC GGTGCGCGCA CTCGAAGGTG CGCCTTATCC CCGCAGAGTG
AGCCCTGTTA TCAAGGTTAT CTCCCAAGAC AACATCCACC AAATCGATTT AGAACAAATA
TTAGCGCCGG AAAATCAATG GATGATCCAT CAAGATCTGC CCAGCGTAAA CGGTACTCGT
TAA
 
Protein sequence
MHLTAFFARS LRICLLLILS CFVFAVQAAW YPADVIADGQ KTLYTPLTKA NQAWRICALL 
PHGKDQYWWG VAFGLSQEAE RQGVTLGIYD AGGYDKIEQQ KQQLHDCYAL KAQAYIIAAN
TADGLIADIE QLSAAGIPVI DLVNGIATDK LTSRSLVSFE DMSVAATEYI AAQQREAINQ
DSPKLKVAWF PGPKGASWVM AAEQGFRRAA AKQEFDTIEG GYGTTELFVQ ADLVRKVLAK
QSVDYVIANA VAATFAARFL DGRRNQTGKV IAFYSNAQTI ELVQKKQLLA TVSDSPVLQA
RIAIDLAVRA LEGAPYPRRV SPVIKVISQD NIHQIDLEQI LAPENQWMIH QDLPSVNGTR