Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3816 |
Symbol | |
ID | 7088851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4523414 |
End bp | 4524496 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462695 |
Product | TMAO reductase system periplasmic protein TorT |
Protein accession | YP_002359716 |
Protein GI | 217974965 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTGA CTGCATTCTT CGCCCGTTCC CTCAGGATTT GCCTCCTCTT AATCCTTAGC TGTTTCGTCT TTGCAGTGCA GGCAGCTTGG TATCCCGCCG ATGTCATTGC CGACGGTCAA AAGACCCTTT ACACGCCACT CACTAAGGCC AATCAAGCAT GGCGGATCTG CGCCTTACTT CCCCACGGTA AAGATCAATA TTGGTGGGGC GTCGCCTTTG GATTATCACA AGAAGCCGAG CGCCAAGGCG TAACGCTTGG CATTTATGAT GCTGGTGGAT ATGACAAGAT TGAGCAGCAA AAACAGCAAC TTCATGATTG TTATGCACTC AAGGCTCAAG CTTATATTAT TGCCGCCAAT ACCGCTGACG GACTGATTGC GGATATTGAA CAACTCAGCG CTGCGGGCAT TCCGGTTATC GATTTAGTCA ATGGTATCGC GACCGACAAA CTCACGAGTC GCTCCTTAGT CAGCTTTGAA GATATGTCCG TTGCGGCGAC AGAATATATT GCGGCGCAGC AGCGAGAAGC TATCAATCAG GACTCACCTA AGCTTAAGGT GGCGTGGTTT CCTGGGCCTA AGGGCGCCTC TTGGGTAATG GCGGCGGAAC AAGGGTTTAG ACGGGCGGCA GCTAAACAAG AGTTCGACAC AATTGAAGGC GGTTACGGTA CGACTGAGTT ATTCGTTCAA GCGGATTTGG TGCGAAAAGT ACTTGCAAAA CAAAGCGTAG ATTATGTAAT TGCCAATGCG GTGGCGGCCA CGTTCGCGGC GCGCTTTCTA GATGGACGCC GGAATCAAAC CGGCAAAGTC ATCGCATTTT ACTCTAATGC GCAAACTATA GAATTAGTGC AGAAAAAGCA GCTACTCGCG ACAGTCAGCG ACTCACCGGT ATTGCAGGCT CGAATTGCCA TCGATCTCGC GGTGCGCGCA CTCGAAGGTG CGCCTTATCC CCGCAGAGTG AGCCCTGTTA TCAAGGTTAT CTCCCAAGAC AACATCCACC AAATCGATTT AGAACAAATA TTAGCGCCGG AAAATCAATG GATGATCCAT CAAGATCTGC CCAGCGTAAA CGGTACTCGT TAA
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Protein sequence | MHLTAFFARS LRICLLLILS CFVFAVQAAW YPADVIADGQ KTLYTPLTKA NQAWRICALL PHGKDQYWWG VAFGLSQEAE RQGVTLGIYD AGGYDKIEQQ KQQLHDCYAL KAQAYIIAAN TADGLIADIE QLSAAGIPVI DLVNGIATDK LTSRSLVSFE DMSVAATEYI AAQQREAINQ DSPKLKVAWF PGPKGASWVM AAEQGFRRAA AKQEFDTIEG GYGTTELFVQ ADLVRKVLAK QSVDYVIANA VAATFAARFL DGRRNQTGKV IAFYSNAQTI ELVQKKQLLA TVSDSPVLQA RIAIDLAVRA LEGAPYPRRV SPVIKVISQD NIHQIDLEQI LAPENQWMIH QDLPSVNGTR
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