Gene Sbal223_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3797 
Symbol 
ID7087461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4500971 
End bp4501402 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID643462676 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_002359697 
Protein GI217974946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0177584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGT TTGCCATGAT AAAAATCTCA AACCGTGTGG AACTTCAGGA AAATGAAATC 
GAGTGGCAAT TTATCCGTTC GAGTGGCGCT GGCGGCCAGC ACTTAAATAA AGTGTCTACC
GCTGCGCAGC TGATCTTCGA TATTAAAAGC TCATCATTGC CCGAGTTTTA CCAAGAACGC
CTGCTCAACA AGGCCGATCA CCGCATCACT AAAAGCGGCA AAATCATCAT TAAATGTCAA
GCGAGTCGCA GCCAAGATGC CAACCGCCAA ACGGCGTTGG AGCAATTTAT CGCCTTAGTC
GCCAGTGTCG GTGAAGTGCA GAAAAAACGC ATCCCTACCC GCGCAACTAA AGGCAGCCAA
ACGCGGCGAT TAGAGTCCAA GAAACAAAAA GGCGCCACTA AAGCCATGCG TCAGCAAAAG
ACTGACTATT AG
 
Protein sequence
MPKFAMIKIS NRVELQENEI EWQFIRSSGA GGQHLNKVST AAQLIFDIKS SSLPEFYQER 
LLNKADHRIT KSGKIIIKCQ ASRSQDANRQ TALEQFIALV ASVGEVQKKR IPTRATKGSQ
TRRLESKKQK GATKAMRQQK TDY