| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3789 |
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| Symbol | mscL |
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| ID | 7087453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4492150 |
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| End bp | 4492560 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643462668 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_002359689 |
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| Protein GI | 217974938 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTAA TTAAAGAGTT CAAGGCTTTT GCGTCCCGTG GCAATGTGAT CGACATGGCC
GTTGGTATCA TCATAGGTGC CGCATTCGGC AAGATTGTCT CGTCCTTCGT GGCCGATATC
ATAATGCCAC CGATTGGGAT CATCTTAGGC GGAGTGAATT TTAGTGATTT GAGCATAGTG
CTGCAGGCAG CTCAAGGCGA TGCGCCTTCT GTCGTCATTG CTTATGGTAA ATTCATTCAA
ACCATTATCG ACTTTACGAT TATCGCCTTC GCTATTTTTA TGGGCGTCAA AGCAATCAAT
CGCTTAAAGC GCAAAGAAGA AGTCGCGCCT AAAGCACCCG CTGCACCGAC TAAAGATCAA
GAACTGCTGT CTGAGATCCG CGATCTACTG AAAGCTCAGC AAGAAAAATA A
|
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| Protein sequence | MSLIKEFKAF ASRGNVIDMA VGIIIGAAFG KIVSSFVADI IMPPIGIILG GVNFSDLSIV
LQAAQGDAPS VVIAYGKFIQ TIIDFTIIAF AIFMGVKAIN RLKRKEEVAP KAPAAPTKDQ
ELLSEIRDLL KAQQEK
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