Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3766 |
Symbol | |
ID | 7087430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4467706 |
End bp | 4469859 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643462646 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002359667 |
Protein GI | 217974916 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGG ATGAGTTTTC TAAATCGCAT AGCCCATCAA ATAATATCTA CTTTAGCGTG CTGAGCTCTA GCTGGCTGAT GATTGTCGCT GCTTTACTTT TTATGGGCAT CTCTTGGTAT GTGCTGGAGC AATATCTTAG AGATAGGGGT GAAGAGCGTT TCGAGAACAG TGTTCAAGAG TTAACTGAAG CGGTGAATCG CAGAATGCTT GCCTACGAGC AAGTCTTACG CGGTGGTGTC GGCTTGTTAT TGTCCTCCAA TAGTGTGACC CGCAAGGAAT GGCAAACCTA TGTTGTCAAT GCACATTTAT CTGAGTATTA CCCGGGTTTC CAAGGCTTTG GCTATGCTCA GTTACTTAAA CCTGACACAT TAGATACCCA CGTCCAACAA GTTCAAGCCG AAGGCTTTAA AGACTATAAA ATTTACCCTG AAGGAGTTCG TGATCAGTAT TGCGTGATCT TGTATTTAGA GCCTTTTGAT TGGCGCAATC AAAGAGCCTT TGGCTATGAC ATGTGCTCCG AGGCTAATCG TCGCAAAGCC ATAGATCACG CCATTACCAC TGGTCAGCCA ACTATCTCTG GCAAGGTCGC CTTAGTGCAA GATACACCCG AAGATGCTAA AGCAGGTTTT TTGATGTATT TGCCAATTTA TCAAGGGATT GTGGCAACGG AGGCTGAACG GAAACAGCAG GCGATTGGAC TCGTGTATGC GGCGTTTAGG ATGGACGACC TCATGCAAGG AATTATGGGG GATCGATTCT CAGGTTTGAA GCTCGCCATT TATGAAAACC CACAGGCAAG TGTTGACAGT TTAATGTTTA CTAGCAGTAA AGTACTGCCA AATCAAAAAG ATGTGTTCTA TCAGTCACAG ACCGACTTAA TTGGCGGTAA GCAGTGGCGC TTGGACATTT CATCACAATC GCGTTTTATC TCAAGATCGG AAGAGACCCA AGGTATCTGG CTGCAATTTA TCGGTTGTGC ATTCATTTTG GCGTTGTTTT ATTCTGTGCT AATCATGGCG CGTAATCGAT ATAAAGAGTC ATTGCTTACC TCTGAGCTAA TCGCGAATGA AAAACGCTTT AGACTCGTCA TTGAAGCCTC TCCAAGCGCA CTATTTATGG TCGATAAGGC AGGGGTTATT ACGTTAGTGA ACACCCATGC CGAACGCTTA TTTGGTTATG CCAGAGACGA GTTACTCGGC CGCTCTATCA ATATGTTATT GCCAGACGCG CTGAGGGATG CGCATCAGCA GCACATGAAT AATTACTTAG TGCAGCCCAT TGCGAAAAAT ATGTCGATGC GGGATGACTT ATTTGGCTGT TGTAAAGATG GCAGTCGACT CGCGATAGAA GTGGGGCTGA CACCTATTCA TTTCAGTAAT GGCATTTTCA TTCTCGCGAC GATTAACAAT GTGTCTGAAC GTAAGCGCAT TGAAGTCCAG CGTGCAGAAC ACATGCAAGA GCTTGAGCGG ATTAATCAAG AACTCGACCG CTTTGCCTAT ATCGCCTCCC ATGATTTGAA ATCTCCACTA CGGGGTATCG AGCAGTTAAC ATCTTGGTTA GCAGAGGATT TATCCGATAA CACCAATGAA AACGTGCAGA AATATCTCGG GCTGATCCAA AGTCGTATTC ATCGCATGGT GTTATTGCTC GATGGGCTAT TGATGTTTTC CCGTATTGGC CGTGTCGATA CTGAAACCAC CGAGGTCAAC AGTCGGCAAC TGGCTGAAGA CATGTTTGCG CTCGTCGCGC CGCCACAGGG GTTTGAATTA GTTCTAAAAG GGGAGTTTCC AAATTTCCAT ACTGTACGCG CACTGTTGGA ATTGGTGATA CGAAATTTAA TCAGCAATGC CATTAAACAC CATGACTTAG GCACAGGTGT GATCACTGTC TTATGTGAGG CCGCGGATAA ACATTATCTC TTCAGTGTGA TAGACGATGG CCCAGGTATC TCAAGTGCCT ATCAGAATAA AGTCTTCGAA ATGTTTCAAA CACTTAAGCC TAGGGATGAA GTCGAAGGCA GTGGTTTAGG GTTATCACTT GTGAAGAAAA CAGTTGAAAG TTTAGGTGGG AATATTCAAC TCAAATCGCA GGGCAGAGGC TGTTGTTTTT ACTTTACTTG GCCTAAGAAA ATAGTGAAAA AGGAGCTTCT ATGA
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Protein sequence | MDKDEFSKSH SPSNNIYFSV LSSSWLMIVA ALLFMGISWY VLEQYLRDRG EERFENSVQE LTEAVNRRML AYEQVLRGGV GLLLSSNSVT RKEWQTYVVN AHLSEYYPGF QGFGYAQLLK PDTLDTHVQQ VQAEGFKDYK IYPEGVRDQY CVILYLEPFD WRNQRAFGYD MCSEANRRKA IDHAITTGQP TISGKVALVQ DTPEDAKAGF LMYLPIYQGI VATEAERKQQ AIGLVYAAFR MDDLMQGIMG DRFSGLKLAI YENPQASVDS LMFTSSKVLP NQKDVFYQSQ TDLIGGKQWR LDISSQSRFI SRSEETQGIW LQFIGCAFIL ALFYSVLIMA RNRYKESLLT SELIANEKRF RLVIEASPSA LFMVDKAGVI TLVNTHAERL FGYARDELLG RSINMLLPDA LRDAHQQHMN NYLVQPIAKN MSMRDDLFGC CKDGSRLAIE VGLTPIHFSN GIFILATINN VSERKRIEVQ RAEHMQELER INQELDRFAY IASHDLKSPL RGIEQLTSWL AEDLSDNTNE NVQKYLGLIQ SRIHRMVLLL DGLLMFSRIG RVDTETTEVN SRQLAEDMFA LVAPPQGFEL VLKGEFPNFH TVRALLELVI RNLISNAIKH HDLGTGVITV LCEAADKHYL FSVIDDGPGI SSAYQNKVFE MFQTLKPRDE VEGSGLGLSL VKKTVESLGG NIQLKSQGRG CCFYFTWPKK IVKKELL
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