| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3763 |
|---|
| Symbol | |
|---|
| ID | 7087427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4464465 |
|---|
| End bp | 4465370 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462643 |
|---|
| Product | alpha-L-glutamate ligase, RimK family |
|---|
| Protein accession | YP_002359664 |
|---|
| Protein GI | 217974913 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.86581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG GTATTTTATC CCAATTCCCC CAGTTGTATT CGACACAACG TTTAGTGGAG
GCTTGTCAAA GCCGCGGACA TGAAGCGGTT GTGATCAATA CACTGAACTG CTACATGAAT
ATTAATTCCA TTAAGCCTAG CATTCATTAT GAAGGCACTG AATTAGTTGG CTTTGATGCC
ATCATTCCGC GTATTCATGC CAGCGTGACT TTCTATGGTT GTGCCGTTGT ACGTCAGTTC
GAAATGATGG GCGTGTATGC GGCGAATGAT TCAATCTCTA TTGCGCGTTC TCGGGACAAA
TTGCGGGCGC TGCAATTGCT CTCCCGTAAA GGGATTGGCA TGCCAGTGAC AGGTTTTGCC
AATAAGCCGA ATGACATCCC CGATCTCATC AATATGGTGG GCGGTGCTCC GTTAGTCATT
AAGTTACTCG AAGGTACTCA AGGGATTGGC GTGGTATTAG CCGAGACGAA AACGGCTGCT
GAGAGCGTGA TAGAAGCATT CTTGGGGCTG AAAGCGAATA TCTTAGTGCA GGAATACATT
AAAGAATCCA ATGGTAGTGA TATTCGTTGT TTTGTTGTCG GTGACAAGGT CATCGCCTCT
ATGAAGCGCC AAGGACCCGA GGGGGATTTT CGCTCTAATC TGCATTTGGG TGGCTGTGGT
GAGGTGGTTA AAATCACTGC AGTGGAACGT AAAATGGCGA TTGCGGCGGT GAAAGCGATG
GGATTGGTGG TCGCTGGGGT GGATATTTTA CGCTCTAACC GTGGCCCTTT GATCCTTGAG
GTGAATTCGG CGCCCGGTAT TGAAGGGATT GAACAAACCA CTGGGATTTC GGTGACTGAG
CCCATTGTTG AATATATCGA GAAAATGGTC GCAGCCCGTA AAACCAACAG ACCCATCATT
GCCTAA
|
|---|
| Protein sequence | MKIGILSQFP QLYSTQRLVE ACQSRGHEAV VINTLNCYMN INSIKPSIHY EGTELVGFDA
IIPRIHASVT FYGCAVVRQF EMMGVYAAND SISIARSRDK LRALQLLSRK GIGMPVTGFA
NKPNDIPDLI NMVGGAPLVI KLLEGTQGIG VVLAETKTAA ESVIEAFLGL KANILVQEYI
KESNGSDIRC FVVGDKVIAS MKRQGPEGDF RSNLHLGGCG EVVKITAVER KMAIAAVKAM
GLVVAGVDIL RSNRGPLILE VNSAPGIEGI EQTTGISVTE PIVEYIEKMV AARKTNRPII
A
|
|---|
| |