| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3755 |
|---|
| Symbol | |
|---|
| ID | 7087419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4459469 |
|---|
| End bp | 4459993 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643462635 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002359656 |
|---|
| Protein GI | 217974905 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000456164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.156287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC AGTCCCTTTT ACTCGCAGGT GTATTAAGTT GCAGTGCGGC TTGGGCGGCC
GATGAAGCGC CAGTGAATCC CGTCACCGAA GATGGGGTGG TTAAAATTGT TTGGCAAAGT
CCTAAGGATT TTCGCGATAT CAAATCATCG GGGGAAATCC AATCCCGCTA TGAGAAGCGC
TTATTTGAGA CCTTAACAGA AAACATCAAT AAAGAAGCGG CGAAGATTTT AAAGCCGAAT
CAAAAGCTTG AAATGACGAT CACCGATGTT GATCTGGCGG GGGATATGCG CCCAACCTTT
GGTGCGACCG CCAATGATTT ACGCATTATT AAAGACATTT ATCCACCGCG TATAACTTTT
TCCTATCAAG TTTTAGAAAA CGATAAAGTG ATTATTGCGG GTGATGAAAA ACTGACGGAT
ATGGGTTTCA TGGGGGGGAT ACAGTCTCTA AGTGACAAAC CTTTTATGTA CGAAACCAAA
ATGTTGACTG ATTGGTTAAA GAAGACGATT GCCCCACAAC TTTAA
|
|---|
| Protein sequence | MKIQSLLLAG VLSCSAAWAA DEAPVNPVTE DGVVKIVWQS PKDFRDIKSS GEIQSRYEKR
LFETLTENIN KEAAKILKPN QKLEMTITDV DLAGDMRPTF GATANDLRII KDIYPPRITF
SYQVLENDKV IIAGDEKLTD MGFMGGIQSL SDKPFMYETK MLTDWLKKTI APQL
|
|---|
| |