| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3754 |
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| Symbol | |
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| ID | 7087418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4457666 |
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| End bp | 4459423 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643462634 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002359655 |
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| Protein GI | 217974904 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000868734 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0557959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTT TAGATCTGGC TAAAGAGCTC GATAAGATAA TTTCTAAATC GGCAATTAAT
CCCTTATTTC AGCCAATTTT CAATATATTA GAACATAAGA TCCACGGTTT TGAAGCCTTG
AGCCGCGGCC CTGAACACAG CCCGTTATAC TCCCCAGTGC CGCTATTTCA GACAGCAGAG
CATGAAGGCA AGTTAAGCGA GTTAGAAACC CTTTGTCGGC GCATTTCACT CGAGCAATTT
AAGCTGCGTC AGTTCCAAGG CAAGCTGTTT ATCAATATCT CACCCAAGGC ATTATTAGAT
CCCGCGCACC CCAAGGGCAT GACCTTACAG CTGTTGCAAC AACTCGGCAT AGCGCCATCG
CAGGTGGTGA TTGAACTGTC AGAGCAATAT CCCGCCGATG ATATAGACTT ACTCAAATCT
TGCTTGAATC ATTATCGCAG CCAAGGTTTT TTAACGGCCA TCGATGACTT AGGTGCGGGT
TATTCAGGTT TAAGGCTCTG GTCAGAATTG TCGCCCGACT ATGTCAAAAT TGACCGCCAC
TTTATCCATG AAATTGATTC GACCCCTGTC AAACAAGAGT TTGTCCGCTC GATTGTGGAG
TTATGCCAAA GCTTAACCTG CAAAGTGATA GCAGAAGGGA TTGAAACGCA AGAGGAATTA
GCCGTACTCA AACAACTGGG TATCGTCTAT TGCCAAGGCT ATTTGTTAGG TCGTCCAGAA
GTGCTCCCCT GCCGCGCGAT GAAAGTGACC TTAGTGCCAA ACAATACTCA GATTCAACCT
AGATACAGCG AATCCGCCGA AAGCCTGTGC ACGAACGCCA TCACAGTGGC GCCCACACTC
AAACTCAAAT TTTTAAGTGA CACCTTTAGC TCGCAACCCG CACTGCAGGC GGTTGTGGTA
GTCGATAATC AGTTGCCGCT GGGGATTATC AGCCGCGCGA CCTTACTCGA ACTTTTCAGT
ACGCCCTATG GTCGTGCCTT GCATGAGAAT CATGCCGTAA GTGAAGTGAT GGACCCGCAG
GTCATCCAAA TTGAGGCCAA CGAACCCTTA TCTACTGTGA GCCAATTGCT GACCTCAGAG
ACGGCCAATA CAGTCGCTCA GCAGTTCATC ATACTTCGCC GAGGCAAACT GCTCGGCATA
GGCCACACTA AAGATTTACT GCAAAGGATC ACAGAGCACA GAATTAAGAT GGCCCGCCAT
GCAAATCCTC TGACAGACTT GCCGGGCAAT GTGCCCATTC AGGAGGAATT AAAACGCCTT
AAAATCCAAA AGAAACACTT TTATCTAGCC TATTTTGATT TATGTAACTT TAAGCCCTAT
AACGATATTT ATGGCTTTTG TCGCGGCGAT GAAGTGATTT GTGAAGTGAC TAATCTGTTA
CTGAAATATA AAAGTGACAA TTGCTTTATC GGCCATGTGG GCGGCGATGA CTTTGTGATT
ATCAGCACCT GTGAACATAT GATCAGCCGT TGCCAACGAA TTCTAGCGGA CTTTGAAACC
CATAAGCATT TGTTTTACAG CGCCGAGCAT TGGCAAGCTC AAGAGATGCT CGCCGACGAT
AGACAAGGCG AAGCCTGCTA CCATCAATTG ATCAGCCTGT GCGTGGGTAT CTTGCCACCA
GCACTGACCT TTAACGCCAA TGAACATAGC CTGTCGACCT TAAGTGCCCG GGCAAAAAAA
CAGGCAAAAT CCGCGAATAA CGGATTTTAC CTGTTAGAAA ATCACCTTAC TATCGAGACT
CAAGCGCTCA GTGCTTGA
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| Protein sequence | MTSLDLAKEL DKIISKSAIN PLFQPIFNIL EHKIHGFEAL SRGPEHSPLY SPVPLFQTAE
HEGKLSELET LCRRISLEQF KLRQFQGKLF INISPKALLD PAHPKGMTLQ LLQQLGIAPS
QVVIELSEQY PADDIDLLKS CLNHYRSQGF LTAIDDLGAG YSGLRLWSEL SPDYVKIDRH
FIHEIDSTPV KQEFVRSIVE LCQSLTCKVI AEGIETQEEL AVLKQLGIVY CQGYLLGRPE
VLPCRAMKVT LVPNNTQIQP RYSESAESLC TNAITVAPTL KLKFLSDTFS SQPALQAVVV
VDNQLPLGII SRATLLELFS TPYGRALHEN HAVSEVMDPQ VIQIEANEPL STVSQLLTSE
TANTVAQQFI ILRRGKLLGI GHTKDLLQRI TEHRIKMARH ANPLTDLPGN VPIQEELKRL
KIQKKHFYLA YFDLCNFKPY NDIYGFCRGD EVICEVTNLL LKYKSDNCFI GHVGGDDFVI
ISTCEHMISR CQRILADFET HKHLFYSAEH WQAQEMLADD RQGEACYHQL ISLCVGILPP
ALTFNANEHS LSTLSARAKK QAKSANNGFY LLENHLTIET QALSA
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