| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3737 |
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| Symbol | |
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| ID | 7087401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4442397 |
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| End bp | 4443383 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643462617 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002359638 |
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| Protein GI | 217974887 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0251056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAATG ACCAAAGCGC AATGAACGAA CTACACTGGC TCATCGATAT GGTGCAAACC
ATAGAGGTGG GATTAGTGGT ATTAGATCGC CATTACAATA TCCAGCTGTG GAACGGTTTT
ATGGAGAATC ACAGCGGTGT TTCCCCAAAT TCGATCAAAG GTCAAAACCT GTTTACCCGC
TTCCCCGATC TGCCCGCCAC TTGGTTAAAG CAGAAAATGG AATCGGTTTT TATGCTTAAA
AACCGTGCTT TTATCAGCTG GGAACAAAGG CCGTACGTTT TCCAATTTAA AAACTACCGC
CCGATCACTG GCCGTGCTGA CTACATGTAC CAAAACGTGA CCTTGTTGCC ACTGGCATCG
CTCACGGGAC AAGTGACCCA TATCAGCGTG ATTATTTATG ACGTGACTGA TATCGCCATC
AACAAGTTAC AACTTAAAGC CGCGAACGAG CAACTCGAGC GCCTAAGCCA AACCGATGGC
CTGACTCAGC TGCATAACCG TCGCCATTGG CAAGAATGTT TAGACCATGA GTACGACATA
TATGCCCGCT ACTCAGGCAT GGCAAGTTTA GTGATGATAG ATATTGATAA CTTTAAACAT
ATCAACGACA GCTATGGTCA TGTGGCGGGT GATAAAGTGA TCCAGCATAT CGCCCACTTA
CTCAGCCAAT CCCTGCGTGA GACCGATTGC GCCGGACGTT ATGGCGGCGA AGAATTTGCA
GTCGTATTAC CCAAAACCAG CGGCGCCGAT GCCATGTATT TCACCGAGCG ACTCAGGGAA
AAAATCGCCG CATCCGTCAT TCTGTATGAA AGCCTGAAGA TATCAGTGAC TGTGAGTTTA
GGTGTGTGCG AAATTGGTTC CCACATCACC AGCAGCTCAA GCTGGATTTC TTGCTCCGAT
AAAGCGCTGT ACGAAGCCAA GCAAAAAGGC CGTAATTGCA GCGTTTTGCA TACCAGTACA
AGTGTGAACA AAACGACCCA AGACTAA
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| Protein sequence | MSNDQSAMNE LHWLIDMVQT IEVGLVVLDR HYNIQLWNGF MENHSGVSPN SIKGQNLFTR
FPDLPATWLK QKMESVFMLK NRAFISWEQR PYVFQFKNYR PITGRADYMY QNVTLLPLAS
LTGQVTHISV IIYDVTDIAI NKLQLKAANE QLERLSQTDG LTQLHNRRHW QECLDHEYDI
YARYSGMASL VMIDIDNFKH INDSYGHVAG DKVIQHIAHL LSQSLRETDC AGRYGGEEFA
VVLPKTSGAD AMYFTERLRE KIAASVILYE SLKISVTVSL GVCEIGSHIT SSSSWISCSD
KALYEAKQKG RNCSVLHTST SVNKTTQD
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