Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3731 |
Symbol | |
ID | 7087395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4430206 |
End bp | 4433922 |
Gene Length | 3717 bp |
Protein Length | 1238 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462611 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002359632 |
Protein GI | 217974881 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGA GTGAGCCGGA TCTGCAACTA AAATCGCCGA TCCAGAAGAA CTACAACCGT GCCGTTTTTT ATACGTACAT TGGCGTTATC GTCATGTCTT TGTTGACCGC ATGGATGTTT TTCGACCGCC AAAAAGCGCA ACAGATGGAA CAGCGTGAAG AACAGGTTCA GCGCCATGTT CTGCAAATTG ATTTGTTACT CGAGTCGAGT ATTAGAGCGG TAAAAAGCTT ACGCAACGTC GCCGTGGATC ATTTGCGCTT AGGCGAACTC GTGCGTAAAG AACGTTTACC CCAATACGGT AAATTCAACG AAAGCGGCCA GTATTTTACC TTAGAACCAA GCTACGCCCA GAGCGGTGAG CCTTTTACTA ACATGGGTAG GATCACTGGC GCAGGTTCCC TCGATGGCCG CAGCGACAAG TTCTATCAAG AACTTGAGAT GTTGTTTGAG CTGTCGCTGT CATTTCCCGT CGCCAAAGAA GCCGCCCCGA AAGCCTCGGC AATTTATTAC CTGTCAAAAC GTAGGATTAT GTCCTACTTC CCTTGGTCGA ATGACGATCA ACGTTTTAGG GACGAACTAC TCAATAAGAA ACAGTTTCAA TACGCCACCC CGGCAATGAA CCCGCAGCGC AGTGTGTTTT GGAGCGAAGC CTATGTCGAC TCCACGGGCA AAGGCTTATT GACCACTTTA GGTGTGCCTG TTTATTTGGA CGATGAATTC ATCGGCTCAA TTAATTTAGA CATGACGCTT GCCTCCTTGG CGCGGCAAAT TCGGGTCTAC TTTAAGATGC CGGGCACAGT GATTTTGCTC GACCAACAGA ACAATATTTT ATCCCACAGC GATTTTGATA GCTCAGACAT CAATCGGGTT TATCACATCA GCCAACGTAT TCCCTCTGAG CTGCATTCTT TGCCTGAGTC GGAATTGTTC GATGCCCACG ACGGCATCAT ACGCAACGGC TATTACATTC ACTCGGTTGC GCTGCATAAC GCGCCTTGGC GTTTACTGTA TTTGCAGGAT GAGGACGACC TATTCCAAGA CTCGTGGGAA AAACTGCAGC TGACCTTTAT TTTGGTGGTT ATCGCCCTGT CTGTGTTGGT GACCATAGTG CATTGGCAGA CGCGTCGATC TTTTGTGAGT CCAGCCTCGC GACTACTGTC GCACCTTGAG GGTTGCTCAC AAGAGCCGCG TAAGCCACCG GAGAAAATCA CCCGCGGCTG GGAACCTTGG TTCTTGCTGG TGAGTCGGAT TTTTGAGGAA AACAAACAAT ATACCCACCA TTTGGCGGAG CAGAATAAGC GGCTCGATAA GCTAGTTGCG CGGCGTACTG AACGCTTAAA AGACACCACA GAGCGGCGTG AGCGCGAATA TGCGCTGCTA CGTTCTTTGC TTGACTCGAT CCCTGAAGCC ATTGTCTTTA AAGATAAAGA AGGCAACTAT TTAGGCTGTA ACAAGGCGGC TGAGCGCATG CTGGGTTACA CAGAGAGCGA GATGATAGGT TTGTCATCTG AGGATCTGAC CTCGCCAGAA ATGGGCATTC GTATCCGCGC CGAAGACGAA CAAGTCTTAA AAGATCGCAC GCCGCTGCGC TACCAAGAAA AGGTTGAGCT TGCGGGTAAA CCTGTGTTGC TCGATACCCT TAAACTGCCT TTCTATAATC GCCGCGGCGA ATTGCAGGGT CTGATTGCCG TGTGGCGTGA TGTGACGCGC GAATACGAGT CCGCCGAACA ATTGCGCCTG TCCGAAGAGC GTTATCACTT AGCCATGGAT GCGGTAGAAG ATGGCCTGTG GGATTGGTAT TTAGACTCTG AACAGATCAT TTGTAACCCA GCCTATTATT CTATGTTGGG TTACAAAACC AATGAGTTCC CCGCTCTTGT GTCGACGATT GATGAATTAT CCCATCCCGA CGATCGGATT CGCGTCGAGG AATACCGTGC TCAGTATCTC GCGGACCCTG TCGGCGCTTA CGAAATCGAA TTCCGTATGT TAGGTAAAAA TGGCGGCTAT CACTGGGTGT TATCCCGTGG CCGTGTGGTG GAGTTCACCG CCGAAGGTCA GCCTAAGCGT ATGCTCGGTA CCCATAAGGA TATTACCCGC CATAAGAGTA ACGAAGTGGC GCTTTTGGAA GCCAAGCAAG ACGCCGAATT AGCTAACCTC TACAAGAGTG AATTCTTGGC TAACATGAGC CATGAGATCC GCACGCCGAT GAATGCCATT ATCGGTATGT TGCAGTTGGC GCAGCGTACC TCGTTAACGG CACAGCAGAA AGATTACCTC GAAAAAGCCG GTTTCTCGGC GCAATCGCTG CTGAGGATCA TCAACGATAT TCTCGACTTC TCTAAAATTG AGGCGGGTAA GTTGGAGCTT GAACGGGTGC CATTCCCGCT GGATAAAGTG CTCGATCACG CCCTCGATCT CAATGCGCTC AAGGCACAGG AACAGGGCGT TGAGTTACTC TTGTATGCCC CTGTGACTGC GGGACTCATT CTTAAGGGCG ATCCACTGCG TTTAGGCCAA GTGCTGATTA ACCTGTTATC GAATGCGGTG AAATTTACCC AATCTGGCGA AATTGAGCTG GGCTGTGAAG ATGTCGGCGA GCGTGATCAT CGGATTACCT TGAAGTTCTG GGTGCGCGAT ACCGGTATCG GCATAGGTAA AGATCAGCAG GATAAGTTGT TTGATGCCTT CGCCCAAGCC GACGGTTCGA CCACCCGTAA ATACGGTGGC ACTGGCTTAG GTTTATCGAT CAGCAAGCAT CTGGTGTCTA TGATGGGCGG TAAGATGCAA GTGCAGAGTG AGCTTGGGGT CGGCAGTACC TTTAGCTTTA CCATCAGCTT TGAAATTGCC GAAGCCGCTA AGATTGAGCC TTTGGTCGTG CCAGAAAAAC TTAATAGTTT ACGCACCTTA GTCGTTGACG ATAACCCGAC TGCACTGCAA ATTTATTCGA CCTTGATGCG AGATTTCCAC TTCGAAGTCG ATACCGCCGC TAGTGGCGCC GAAGCGCTGT ATAAACTGTC GCGGGCACCA ATCGATCTGC TTTTGCTCGA CTGGATGATG CCAGAAATGG ACGGCAGCGA TGTGGTCAGC GCCATAGATA CTATGGTCGC CGAAGGCCGC TTAGCGAAAC GACCAGTGAT TATAATGATG ACGGCCTATG CAGCAGAGCC TTTGCAGCAT GAAGTCGATA GCGCCAATGT GTTTGCCGTC CTGCAAAAAC CCTTCAAGGC ATCGAGCCTG TTCGATGAGA TCATTGCTGC CTTTGCCGAT GAGCCGAGAT TGAATGTGGT TCAGCCTATG GTTGAAGTCC AAGTTGAAGA CGGAGAACAC ACAGGTTTAG TGCTGCTGGT GGAAGATAAT TTTATCAATC AGCAAGTGGC GACTGAACTC CTTAAAAGTG CAGGCTATGA AGTGGTGCTG GCCGGTAATG GCCAAGTGGC GCTGGATACC ATCGACTCGC GGCCGTTTGA TGCTGTGTTA ATGGATATTC AAATGCCAGT GATGGACGGG TTAACGGCTG CAAGGGCATT GCGTGAGCGT TTTAGTGCCG ATGAACTGCC CATTATTGCC ATGACAGCCC ATGCCATGTC GGGCGATAGG GAAAAGAGTT TAGCGGCGGG GATGAATGCC CACATCACTA AACCCATAGT ACTCAACGAA TTATTTGAAA CATTAAATCA CTGGATCAAA CATAAGAATC AGCATCAGAA TCGTTAA
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Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VMSLLTAWMF FDRQKAQQME QREEQVQRHV LQIDLLLESS IRAVKSLRNV AVDHLRLGEL VRKERLPQYG KFNESGQYFT LEPSYAQSGE PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSKRRIMSYF PWSNDDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF IGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDSSDINRV YHISQRIPSE LHSLPESELF DAHDGIIRNG YYIHSVALHN APWRLLYLQD EDDLFQDSWE KLQLTFILVV IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITRGWEPW FLLVSRIFEE NKQYTHHLAE QNKRLDKLVA RRTERLKDTT ERREREYALL RSLLDSIPEA IVFKDKEGNY LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QVLKDRTPLR YQEKVELAGK PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY LDSEQIICNP AYYSMLGYKT NEFPALVSTI DELSHPDDRI RVEEYRAQYL ADPVGAYEIE FRMLGKNGGY HWVLSRGRVV EFTAEGQPKR MLGTHKDITR HKSNEVALLE AKQDAELANL YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGIGKDQQ DKLFDAFAQA DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EAAKIEPLVV PEKLNSLRTL VVDDNPTALQ IYSTLMRDFH FEVDTAASGA EALYKLSRAP IDLLLLDWMM PEMDGSDVVS AIDTMVAEGR LAKRPVIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL FDEIIAAFAD EPRLNVVQPM VEVQVEDGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVL AGNGQVALDT IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADELPIIA MTAHAMSGDR EKSLAAGMNA HITKPIVLNE LFETLNHWIK HKNQHQNR
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