| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3720 |
|---|
| Symbol | |
|---|
| ID | 7086336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4415768 |
|---|
| End bp | 4416649 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462600 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002359621 |
|---|
| Protein GI | 217974870 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTCTG CTAAACCTTC GGGATTAATT GAATTACATT TGGCTGTGCT GCTATTTGGC
GGCACGGCTT TGTTTTCTAA ATTAATCCCA CTCAGTGCCC TCGACATCAC CTTCCTACGC
TGTATCGTCG CCGCCACTGT GTTAGGTTTG CTGGTCAAAC TCAGCCGTAA ACGGCTAACG
CTAGCCAGCA AACAAGATTA TCTGGTCGCC ATCGGGCTTG GGGTTATCGT AAGTCTGCAT
TGGGTCACGT ATTTTGCCGC CATGCAGCTC TCGTCGGTCG CCATTGGCAT GATTGCATTT
TTCACCTATC CGGTGATGAC AGTGATTGCC GAGCCGTTGC TGACAGGCAG TAAAATAAAA
TTACTCGATA TCATCAGCGG CGCGTTAGTG CTGATTGGGG TGATATTACT CATCCCAGAG
GCCAATTTAG GTAACGACAC TACGCTGGGC ATTGCCATCG GCATAGTGTC CGCCATCTTG
TTCACCGCCC GTAACTTATT GCACAAACGC TACTTTTCCC AGTACAGCGG CCCACATGCC
ATGTTCTACC AAACCTTGGT CGCCGTCGTG TTCCTAATGC CGTGGCACCA AACGGAACTG
AACAGCATCT CACTCGAAGT GTGGGGGTTA ATTATTTTAC TCGGCGTCGT CTTTACCGCC
GCCCCCCACG CACTATTTAC TTCCGCACTG AGGCAACTCA GCGCCAAAAC GGTTGGGCTA
GTCTCTTGCT TACAGCCCTT CTATGGCGCC ATGTTAGCGC TGATTATTTT GAGTGAAGAG
CTCAATCTTA ATACCGTAAT CGGCGGCACT ATCATAGTCG CGACCGCCAT CTTCGAAACC
CATCAATCGC ACCAGTCACA GCGGCGAAAA AAGAACGCCT GA
|
|---|
| Protein sequence | MSSAKPSGLI ELHLAVLLFG GTALFSKLIP LSALDITFLR CIVAATVLGL LVKLSRKRLT
LASKQDYLVA IGLGVIVSLH WVTYFAAMQL SSVAIGMIAF FTYPVMTVIA EPLLTGSKIK
LLDIISGALV LIGVILLIPE ANLGNDTTLG IAIGIVSAIL FTARNLLHKR YFSQYSGPHA
MFYQTLVAVV FLMPWHQTEL NSISLEVWGL IILLGVVFTA APHALFTSAL RQLSAKTVGL
VSCLQPFYGA MLALIILSEE LNLNTVIGGT IIVATAIFET HQSHQSQRRK KNA
|
|---|
| |