| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3695 |
|---|
| Symbol | astD |
|---|
| ID | 7089629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4386897 |
|---|
| End bp | 4388357 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643462575 |
|---|
| Product | succinylglutamic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_002359596 |
|---|
| Protein GI | 217974845 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACATT ATATTCAAGG TCAGTGGCAT GCTGGCAAAG GTCATGACGT GGCCTCAATG
AACCCAGCCA ATACTCACAC TATTTGGACA GGTAAAACTG CCACAGCAGA ACAAGTTAAC
GCCGCCGTTG ATGCCGCGCG CGCCGCGCAG TTTGATTGGT TTATGTTGGG TTTCGATGCA
CGCTTAGCCA TAGTCGAAAC GTATCGCAGC CAACTCGAAG CCAACAAAGC GGAACTGGCT
GAAACGATTG CCCAAGAAAC GGGTAAACCT CAGTGGGAAA CTGCGACCGA AGTCGGCGCC
ATGATAGGCA AAATTGCGCT ATCAGCCGCG GCTTACAATA AACGTACGGG CACTGAAGCC
AACGATACGC CAGCGGGACG CGCGGTTATC CGTCACAAAC CCCACGGTGT TGTGGCGGTG
TTCGGTCCTT ACAATTTCCC CGGTCATTTG CCGAACGGTC ACATAGTGCC TGCGCTGCTG
GCGGGGAATA CTGTGATTTT TAAACCTTCT GAATTGACGC CTAAAGTTGC TGAGCTGATG
GTTAGCCTAT GGGATAAAGC GGGTCTGCCT GCTGGCGTGC TTAACTTAGT CCAAGGTGAA
GTGGATACGG GTAAAGCACT GGCTTCTCAC CCGCAGCTCG ATGGTCTGTT CTTTACTGGC
AGCTCACGCA CAGGCCATTT TTTACATCAA CAATATGCCG GTCATCCGGG CAAGATTTTA
GCACTTGAGA TGGGTGGCAA TAACCCACTG ATCATTAAAG GTGTGCAGGA TATCAAAGCT
GCCGTGCACG ATATTTTGCA GTCGGCTTAT ATCTCATCTG GGCAACGTTG CACTTGTGCG
CGCCGTCTAT ATGTAGAGCA AGGCGAGCAG GGCGATGCCT TGATTGCCAT GTTAGCTGAT
GCGGTCAAAC AGATTAAAGT CGGTCCTTGG AACTCGCAGC CACAACCTTT TATGGGCTCA
ATGATTTCTG AAACTGCTGC TAAAGGTATG GTTGCGGCGC AGGCGAATCT GCTGAATTTG
GGCGGTGTGT CGTTAGTCGA GTTAACCCAT TTAGAAGCGG GTACGGGTTT AGTCTCTCCT
GGCCTTATCG ATGTGACTGC GATCGATGCA TTGCCGGATG AAGAATACTT CGGACCTCTG
CTACAGCTAG TGCGTTATAG CGATTTTGAT CAGGCAATCA AGTTGGCTAA CCAAACGCGT
TATGGTTTGT CTGCGGGTTT ACTGGCCGAT AGCCGTGAAG ATTATGACTA TTTCCTCGCG
CGCATTCGTG CAGGGATTGT TAACTGGAAC AAACAAATCA CTGGCGCATC GGGCGCAGCA
CCTTTTGGTG GCGTAGGTGC ATCGGGTAAC CACAGAGCGA GCGCTTTCTA TGCCGCCGAT
TACTGTGCTT ATCCCGTCGC TTCGGTCGAG GCCGATACGG TGAGTTTACC TGCGACACTA
AGCCCAGGTT TGAGCTTGTA A
|
|---|
| Protein sequence | MTHYIQGQWH AGKGHDVASM NPANTHTIWT GKTATAEQVN AAVDAARAAQ FDWFMLGFDA
RLAIVETYRS QLEANKAELA ETIAQETGKP QWETATEVGA MIGKIALSAA AYNKRTGTEA
NDTPAGRAVI RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVIFKPS ELTPKVAELM
VSLWDKAGLP AGVLNLVQGE VDTGKALASH PQLDGLFFTG SSRTGHFLHQ QYAGHPGKIL
ALEMGGNNPL IIKGVQDIKA AVHDILQSAY ISSGQRCTCA RRLYVEQGEQ GDALIAMLAD
AVKQIKVGPW NSQPQPFMGS MISETAAKGM VAAQANLLNL GGVSLVELTH LEAGTGLVSP
GLIDVTAIDA LPDEEYFGPL LQLVRYSDFD QAIKLANQTR YGLSAGLLAD SREDYDYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADTVSLPATL
SPGLSL
|
|---|
| |