| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3688 |
|---|
| Symbol | |
|---|
| ID | 7089622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4380849 |
|---|
| End bp | 4381394 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462568 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_002359589 |
|---|
| Protein GI | 217974838 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA GGCTATTTCT CGGCTTCGCG CCTACCGCTG CGCAAATGAC AAGGCTGAGT
GATATACAAC AGCAGCTAAT TTGTCACCTC AATCCTGAGG CGAAAGCGGT TAGCGTCACT
AATATGCATT TAACGCTCTG CTTTTTAGGG CAAGTTGACG ACGAGCAACG CATCGCCCTC
CTTGATGCGA TTGACTGCTT AGCTAAGCCT AGATTCAGCG TTCAACTTAA CCAGCTCGAC
TTATGGCCCA ATGCCCAAGT TTGTTGCTTG AAAGGCGATA ACGTTGAGCC GCCGTTAGCG
CAATTAGCTA AGCAGACGCA AGCAATCGCA GGCCGCCTGC AATTGCATAG CAGTGAACAC
CACTTTTGCC CGCACATCAG TTTATTTAGG AAGGCTAAAG AATGGACGCT AAATGAGTCG
GCGTTATTGC AACTCAAGGA CATGAATACG CTAACGTTAA CGCCCGAATG TTTGCATTTA
TATCATTCAA AAAGCACAAG CACGGGTGTG GAATATCACA TCCTACATTC TTGGACGCTC
GGTTAG
|
|---|
| Protein sequence | MQQRLFLGFA PTAAQMTRLS DIQQQLICHL NPEAKAVSVT NMHLTLCFLG QVDDEQRIAL
LDAIDCLAKP RFSVQLNQLD LWPNAQVCCL KGDNVEPPLA QLAKQTQAIA GRLQLHSSEH
HFCPHISLFR KAKEWTLNES ALLQLKDMNT LTLTPECLHL YHSKSTSTGV EYHILHSWTL
G
|
|---|
| |