| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3612 |
|---|
| Symbol | |
|---|
| ID | 7088727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4287227 |
|---|
| End bp | 4288117 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643462494 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002359515 |
|---|
| Protein GI | 217974764 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC GGAATCTGAA CGATCTTTTG TGCTTCGTCA CCGTCGCTCG CGAAGGCAGT
TTTACCCGAG CCGCTGCCTT ACTCGGTGTC ACCCAATCGG CACTGAGCCA AGCAATAAGT
GGTTTAGAAA CCCGACTTGA AATCAGGCTG TTAACGCGCA CGACTCGCAG CGTATCGGCG
ACAGAGGCAG GCGAACGCCT GTTAAATGCG ATAGGTAATC GATTTGATGA AATTGAATCC
GAGCTGGATG CGTTAACGGC CATGCGTGAC AAACCCGCCG GAACAGTCAG GATCACCTGC
GGTGATTTCG TGCTGCGAAC CTTACTCATC CCAAAACTGT CGCCGTTACT CCACAACTAT
CCCGATATTA AAGTCGAATT CGATGTAAAT TATGGCTTTA GAGATATAGT GGCGGATCGC
TTCGATGCCG GCATCCGCCT AGGCGATACC ATAGATAAAG ACATGATCGC GATCCCTATC
GGCCCGCATC AAACAATGGC AGCCGTTGCA ACGCCCGCTT ATTTTGCACA GCATCCCATC
CCCAAACACC CACAGGATCT TATCGAGCAT AACTGCATTA ACATTCGCTT CCCGACCCAC
GGTGGTTTGT ATGTATGGGA GTTTGAAAAA GACGGCAAGC AATTGAATGT GCATGTGGAC
GGCCAACTTA TCTTTAATGC GTCGCACCAT ATCGTCGATG CAGCATTACA AAGCAACGGT
ATCGCTTACC TGCCTGAAGC AGAGTTTGAA CCCCATATCA AAACAGGGCG TTTAGTCAAA
GTCCTTGAAG ACTGGAGCCT GTCTTTTGCC GGCTATTACC TGTATTACCC CAGTCGCCGC
CAACCCTCCC CCGCTTTTAC ACTCGTCGCC GACGCACTGC GTTTACGCTG A
|
|---|
| Protein sequence | MMKRNLNDLL CFVTVAREGS FTRAAALLGV TQSALSQAIS GLETRLEIRL LTRTTRSVSA
TEAGERLLNA IGNRFDEIES ELDALTAMRD KPAGTVRITC GDFVLRTLLI PKLSPLLHNY
PDIKVEFDVN YGFRDIVADR FDAGIRLGDT IDKDMIAIPI GPHQTMAAVA TPAYFAQHPI
PKHPQDLIEH NCINIRFPTH GGLYVWEFEK DGKQLNVHVD GQLIFNASHH IVDAALQSNG
IAYLPEAEFE PHIKTGRLVK VLEDWSLSFA GYYLYYPSRR QPSPAFTLVA DALRLR
|
|---|
| |