| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3587 |
|---|
| Symbol | |
|---|
| ID | 7088702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4256642 |
|---|
| End bp | 4258408 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643462471 |
|---|
| Product | Alkaline phosphatase |
|---|
| Protein accession | YP_002359492 |
|---|
| Protein GI | 217974741 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTA CCGTAACTCG TCGTGACTTT TTGGCTATGT CGGCCAAAGG TGTTGGCGTT
GCTGTGATCT CTTACGGCTT GATGGGCTGT AGCGATAGTA ATGATGATAA TTCTGTACCC
GCGCAATTTT TACATGGGAT TGCCAGTGGC GATCCTGCTA TTGACGCTGT TATCCTTTGG
ACCCGTGTCA CGCCTGAGTC TGAGGGCGAT GTAAAAGTGA GTTGGCAAGT GGCAAGCGAT
GCGGCCTTTG CTCAATTAGT GACTACGGGT GAGATGGTCA CTAATGCAAG CCGTGACTAC
ACGGTTAAGA TTGATGCCCG CGGTTTACGT GCTGGCCAAA ACTACTTTTA CCGCTTTATG
ACAGGTGACA AAACCTCAGC CGTGGGTAAA ACCCGTACTC TACCTGAGGG CGATGTGAGT
TCTGTCAAAC TGGCGGTGAT GTCCTGTGCG AACTTTCCAG CCGGATACTT TAACGTATAT
GAATTAGCGG CGGCGCAGGA TGACTTAGAT GCCGTGGTGC ATTTAGGCGA TTACATCTAT
GAATATGCCC GTGGCGGTTA TGCCAGTGAG CATGCTGTAG AGCTTGGCCG TGAAGTCTTA
CCGGCTACTG AGTTGCTGAC ATTGGGCGAT TATCGCACCC GTTATGCTCA GTACCATACC
GATGCGAGCC TGCAAAAGTT ACACGCGAAA GTGCCTTTTA TCACAGTGTG GGATGACCAC
GAAGTGGCCA ACGATACTTG GCGTGATGGC GCTGAGAATC ATAACGAAGG CGAAGGCGAT
TTTGCCGTCC GCAAAGAAGC GGCACTGCAA GCCTATTTCG AGTGGCTGCC TATTCGCCCA
TGGCGCGAAG GGAACCATGA AGAGATTTAC CGCAGCTTCA GTTACGGCAA TCTCGTCGAC
CTGCACATGC TCGATACCCG TGTATTGGCC CGTGATAAAC AGCTCGATTA TGCCGACTAT
ATGGATCCGA CAACGGGTTC GTTTGCGGGC GAGCGTTTCC TTGCCGATGT GACTTCGACC
ACTCGCACTA TGCTGGGTCT GACGCAATTG TTATGGCTGC AGGGCACTCT GCTGCAAGCA
ACGGGCAAGT GGCAGGTGTT AGGGCAACAG ATTTTGATGG GCAAGATGTC ATTGCCGGCG
GCGATTGCCA CTCAGCAGAT GAGCATTCCC CAATATGCTA TGTTAGGCGC GTTAGCTAAG
TTAGCGGCGC GTGCTGCGGC AAATGATCCC ACACTGACTG CCCAAGAGTT GCAATATCTT
CAGGCTAATC AAGCCTTATT AACCCCAGAA GTTATCGCAC TGCTGCAATT ACCTGCCATT
CCATACAACT TAGATGCTTG GGACGGTTAT GCCTATGAGC GTGAGGTGAT TTTAGGTACG
GCTAAATCGA AAAACCTCAA CCTAGTCGTG ATCGCGGGTG ATACCCATAA TGCCTGGGCT
AACGAGCTTA AAGATGTGAA TGGCGATACC GTTGGAGTGG AGTTTGCGAC CAGCTCAGTG
TCTTCACCAG GTCTTGAGTA CTATTTGAAT CTGCCCGCTG AGCAGATCCC TGCGACTGAG
GCAGCGATCG TCGAGTTAGT GCCAGATCTT AAGTACGCTA ACTTAAGAGA TCGCGGCTTT
ATGACGCTCA CTTTCACCGC TGATGAGGTG CGCAGCGACT GGCATTATGT GGATACCATT
CTGTCGAAGG ATTTCCAAGC GGCAACGGCA CGTGGCTATA GCGCCAAGGC AAAAGTGGGC
GAGCATGTGA TTACGCCTAT TGTTTAA
|
|---|
| Protein sequence | MNRTVTRRDF LAMSAKGVGV AVISYGLMGC SDSNDDNSVP AQFLHGIASG DPAIDAVILW
TRVTPESEGD VKVSWQVASD AAFAQLVTTG EMVTNASRDY TVKIDARGLR AGQNYFYRFM
TGDKTSAVGK TRTLPEGDVS SVKLAVMSCA NFPAGYFNVY ELAAAQDDLD AVVHLGDYIY
EYARGGYASE HAVELGREVL PATELLTLGD YRTRYAQYHT DASLQKLHAK VPFITVWDDH
EVANDTWRDG AENHNEGEGD FAVRKEAALQ AYFEWLPIRP WREGNHEEIY RSFSYGNLVD
LHMLDTRVLA RDKQLDYADY MDPTTGSFAG ERFLADVTST TRTMLGLTQL LWLQGTLLQA
TGKWQVLGQQ ILMGKMSLPA AIATQQMSIP QYAMLGALAK LAARAAANDP TLTAQELQYL
QANQALLTPE VIALLQLPAI PYNLDAWDGY AYEREVILGT AKSKNLNLVV IAGDTHNAWA
NELKDVNGDT VGVEFATSSV SSPGLEYYLN LPAEQIPATE AAIVELVPDL KYANLRDRGF
MTLTFTADEV RSDWHYVDTI LSKDFQAATA RGYSAKAKVG EHVITPIV
|
|---|
| |