Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3563 |
Symbol | |
ID | 7088678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4228069 |
End bp | 4228608 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643462447 |
Product | membrane-flanked domain protein |
Protein accession | YP_002359468 |
Protein GI | 217974717 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0439159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA AGATCATTCA TCAAGCGGAC TTTGAGTCCA ATCTAGGTTT GTATTGGTTG CTTTCAGGGG CCGCCTATTT CAGCCTCAGC ATAGTCGGCA TTCCCTTGTT ATTGCTTTGG TTTCCAATCG GGCTGTGGGG AACTCGCCGC TATATTCGTA ATATGAGTGC CGAGCTCACC AGTAATAAGT TGATTGTGCG CCGCGGAATA TTAACTCGTA CCGAAAATAC AGTGCCTTTG GACAAAATTA CCGATATGGC ATTGATCCAA GGCCCAATTA TGCGCCTATT TGGTCTGCAT AAACTCACGG TAGAAACCGC AGGGCAATCG GGCGCAGGCG CCTTGATAAG CTTAGTCGGC ATAGTTGATG CGCCTCAATT TAGAACCCGC GTATTAGAAC AAAAAGAACG TCTTACTCAG CGCCCACATC CAGCGAGTCC ATCTGTACAA CCTGATGATG CGTTATTACA AAACGTAGTC GAGATGGTAG CAAGCCTAAA ACGAATTGAA GCCTTGCTCA GCCAAAAATT AAATAGATAA
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Protein sequence | MEDKIIHQAD FESNLGLYWL LSGAAYFSLS IVGIPLLLLW FPIGLWGTRR YIRNMSAELT SNKLIVRRGI LTRTENTVPL DKITDMALIQ GPIMRLFGLH KLTVETAGQS GAGALISLVG IVDAPQFRTR VLEQKERLTQ RPHPASPSVQ PDDALLQNVV EMVASLKRIE ALLSQKLNR
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