Gene Sbal223_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3563 
Symbol 
ID7088678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4228069 
End bp4228608 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID643462447 
Productmembrane-flanked domain protein 
Protein accessionYP_002359468 
Protein GI217974717 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0439159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA AGATCATTCA TCAAGCGGAC TTTGAGTCCA ATCTAGGTTT GTATTGGTTG 
CTTTCAGGGG CCGCCTATTT CAGCCTCAGC ATAGTCGGCA TTCCCTTGTT ATTGCTTTGG
TTTCCAATCG GGCTGTGGGG AACTCGCCGC TATATTCGTA ATATGAGTGC CGAGCTCACC
AGTAATAAGT TGATTGTGCG CCGCGGAATA TTAACTCGTA CCGAAAATAC AGTGCCTTTG
GACAAAATTA CCGATATGGC ATTGATCCAA GGCCCAATTA TGCGCCTATT TGGTCTGCAT
AAACTCACGG TAGAAACCGC AGGGCAATCG GGCGCAGGCG CCTTGATAAG CTTAGTCGGC
ATAGTTGATG CGCCTCAATT TAGAACCCGC GTATTAGAAC AAAAAGAACG TCTTACTCAG
CGCCCACATC CAGCGAGTCC ATCTGTACAA CCTGATGATG CGTTATTACA AAACGTAGTC
GAGATGGTAG CAAGCCTAAA ACGAATTGAA GCCTTGCTCA GCCAAAAATT AAATAGATAA
 
Protein sequence
MEDKIIHQAD FESNLGLYWL LSGAAYFSLS IVGIPLLLLW FPIGLWGTRR YIRNMSAELT 
SNKLIVRRGI LTRTENTVPL DKITDMALIQ GPIMRLFGLH KLTVETAGQS GAGALISLVG
IVDAPQFRTR VLEQKERLTQ RPHPASPSVQ PDDALLQNVV EMVASLKRIE ALLSQKLNR