Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3556 |
Symbol | |
ID | 7088669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4219269 |
End bp | 4219823 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643462440 |
Product | nodulation protein L |
Protein accession | YP_002359461 |
Protein GI | 217974710 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00247017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00893631 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGAAT TCCAAAAGAT GATCACAGGC CAAGAATATG ATTGCCTTGC CAACGAACTA TTAAGTTTAC GAGCTCAGCA GCAACGGCTG AATCGACAAT TAAATCAAAT GATTGACCAA GATACCCCAG AGTACAGCCA ACTCTGCCAG CAGCTCATTC CCCATAAATC ACCAGCCGCA ACGATATCCA CGCCGATTTT TATCAGTTAT GGCGCCAACC TATCCCTTGC TGACAAAGTG TTTATCAATG TGAATGTCAC CTTGCAGGAT AATGCACCTA TTTTTATTGG CGAGCAGACT ATGGTCGGCC CCAATGCACA ATTTTATACC TCGAGTCACC CACTCGATGC CGAGCTGCGT TGCTCAGGTT TAGAAACCGC TAAAGCAATT AAGGTCGGTA AACGGGTATG GATTGGTGGC GGCGCTATCA TAATGCCAGG CGTCACTATT GGTGATGACG CCATCATAGG CGCAGGTGCT GTAGTCACAA AAAATGTGGC CGCCAAAACC GTGGTCGCTG GTAACCCCGC GAAGCCGATC AGGCTGCTAA TTTGA
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Protein sequence | MTEFQKMITG QEYDCLANEL LSLRAQQQRL NRQLNQMIDQ DTPEYSQLCQ QLIPHKSPAA TISTPIFISY GANLSLADKV FINVNVTLQD NAPIFIGEQT MVGPNAQFYT SSHPLDAELR CSGLETAKAI KVGKRVWIGG GAIIMPGVTI GDDAIIGAGA VVTKNVAAKT VVAGNPAKPI RLLI
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