| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3555 |
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| Symbol | |
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| ID | 7088668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4218439 |
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| End bp | 4219191 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643462439 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002359460 |
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| Protein GI | 217974709 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.114028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00457022 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCCTTTG AAGTGGTCGG CCTCATAATA TGGCAGTTTT CTTTATTGAA GTTGAGTATT
GACGTGCGTT TAGACAAATT TATCTGTGAG AGTACCCCAC TGACTCGCTC ATTAGCGAAA
AAAGCCCTGC ATCGCGGTGA CATTACTTGC GACGGCATAG TCGTCAAAGA TTCGGGCTTT
AAAGTGACTG AAGGTATGCG TGTTTGTCTC GAGGGCGAGC CTATCGCCTT AGTGGGCGTA
CGTTATTTAA TGCTCAACAA ACCGGTCGAC ACCATTTGTT CAACGATTGA TGAAACCTAT
CCATCGGTAT TGAGCTTAGT GGATGTGCCA AAGCCTGAAA CCTTGCACAT TGCCGGCCGT
TTAGATGCCG ATACCACAGG GCTAGTGCTG ATCACGACCG ACGGCCAGTG GTCGCATAAA
ATCACTTCAC CGAAGAAAGA ATGCGGTAAA CGCTATTTAG TGCAACTCGC CGATCCTGTG
GATGCCAGCT TGATTGCAAT ATTTGCCGCT GGCGTTGAAT TACGCGGTGA AGATGGCTTA
ACTAAGCCTG CATTGCTGGA GATTATTGAG CCGCAATTAG TGCGACTCAC CATCACTGAA
GGTAAGTACC ATCAAGTGAA ACGTATGTTT GCTGCTGTGG GCAACCACGT GCAAGGGTTA
CACCGTGAAA GTGTGGGCCA AATTGAATTA GATCCCGCCT TAGCGCTGGG TGAATGGCGT
TATTTGACCG CCGAAGAAAT AGCATCAGTT TAA
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| Protein sequence | MPFEVVGLII WQFSLLKLSI DVRLDKFICE STPLTRSLAK KALHRGDITC DGIVVKDSGF
KVTEGMRVCL EGEPIALVGV RYLMLNKPVD TICSTIDETY PSVLSLVDVP KPETLHIAGR
LDADTTGLVL ITTDGQWSHK ITSPKKECGK RYLVQLADPV DASLIAIFAA GVELRGEDGL
TKPALLEIIE PQLVRLTITE GKYHQVKRMF AAVGNHVQGL HRESVGQIEL DPALALGEWR
YLTAEEIASV
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