| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3528 |
|---|
| Symbol | |
|---|
| ID | 7088641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4192954 |
|---|
| End bp | 4193520 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643462412 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_002359433 |
|---|
| Protein GI | 217974682 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3056] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000697535 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGC TATTACTGAC TTTGACTTTT CCCCTGCTGT TCGCGGGCTG TGCCAGCCAA
AATCCGACTC ATATGGCTTT CAGTCCCCAA GTGCCCAATA TCAGCCAACA AACTGCACAA
CGTGTTCCTA TCTCTCTTGA AACCGTCGAT ACACGCACCG TCGATTACGT GGCGCGATTT
ATTGAAGAAG GGACAAAAAC ACGTTTGGTC GGCCCGAGTG AACCGCCTAA ATTGCTGCTC
GATGAAGTAT TCCGCGCCGG CTTTAGCCAA GCGGGTTATC AAATCGATCC TAGCGCGACT
AATTCAGTGC AAATTCAATT AGAAGAATTG CAAATGGATG TCACTAAAAA GACTTTTGGC
TATGAGGCAA AACACAGTGT GTTAATCGCA GTGCAAGCCA AAAACTCAAC CCAAGAACTG
GTTAAACGTT ATAAGGCAAA AGGCACCTTG AAAGGCCCTT TAACGCCCGA TTTTGCGACC
TTAGAGCTGG ATATGAATAA ATTACTCGGC CAACTCACAG GTGAAATTCT CAATGATCCT
GAGCTTAATC AGTTTCTACA ACAATAA
|
|---|
| Protein sequence | MKRLLLTLTF PLLFAGCASQ NPTHMAFSPQ VPNISQQTAQ RVPISLETVD TRTVDYVARF
IEEGTKTRLV GPSEPPKLLL DEVFRAGFSQ AGYQIDPSAT NSVQIQLEEL QMDVTKKTFG
YEAKHSVLIA VQAKNSTQEL VKRYKAKGTL KGPLTPDFAT LELDMNKLLG QLTGEILNDP
ELNQFLQQ
|
|---|
| |