Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3525 |
Symbol | |
ID | 7088638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4189867 |
End bp | 4190733 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643462409 |
Product | fatty acid hydroxylase |
Protein accession | YP_002359430 |
Protein GI | 217974679 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000324815 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATATCG CCTCGCTGAT CCAGCACCCC GAAGTGTTAC TGCTCGTGCT CGCGCCGTTG TTTTTCGTGT GTATTTTACT GGAATGGTAT TTTGGCGATA AAAGACAAAA GCTGCCGTTA ACTGCACGTT ATCGCGGCCA AGAAGTGCTG TGTAATTTCA GCCTCGCGGC CATGCATCAA GGCGCCGATC TGCTCACTGG CTTGTTGATC GCTAAGCTGT ATCTGGCGAT GTTTGGTTGG AAGTTATTCG ATATTGAAAT GGGCCCATTA AGCTTTATTG CTTTGATGAT CGCGCAGGAC TTTTGTTATT ACTGGTTCCA CAGGGCGAGC CACAGAGTGC GCTGGATGTG GGCGGCTCAC GTGGTGCACC ACAGCTCTGA GAATATGAAT TTTAGCACTG CGTTTCGCCA GAGTTTAATG TATCCCTTTG CGGGCATGTG GTTATTTTGG TTGCCACTGG TAGTCATAGG TTTCGACCCA AACTGGGTGG TATTTGTGGT ATTACTCAAT CTGGGATTGC AATTTTTTGT GCATACCCAA GCGATTAAAT CACTCGGACC GCTGGAATGG GTATTCAACA CACCGTCACA CCACAGGGTG CACCACGGTC GTAATCCCCA ATATATAGAT AAAAACTATG CGGGTGTGCT GATTATCTGG GACAAGCTGT TTGGTACTTT TGAGCCCGAG GTAGAGACGG TGATTTACGG CATCACTAAG CCTGTGAATA GTTTTAATCC CCTTAAAGTG ACGTTTAGCG AATGGCGAGA CATGTTTGCT GAGGTCACCG CGACAGGCTT GAGTGTTAAA CAACGACTAC ATATCTTGTT TGCTCCGCCT TCCAGCAGTT TAAAAAGCGA GGAATAA
|
Protein sequence | MDIASLIQHP EVLLLVLAPL FFVCILLEWY FGDKRQKLPL TARYRGQEVL CNFSLAAMHQ GADLLTGLLI AKLYLAMFGW KLFDIEMGPL SFIALMIAQD FCYYWFHRAS HRVRWMWAAH VVHHSSENMN FSTAFRQSLM YPFAGMWLFW LPLVVIGFDP NWVVFVVLLN LGLQFFVHTQ AIKSLGPLEW VFNTPSHHRV HHGRNPQYID KNYAGVLIIW DKLFGTFEPE VETVIYGITK PVNSFNPLKV TFSEWRDMFA EVTATGLSVK QRLHILFAPP SSSLKSEE
|
| |