| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3487 |
|---|
| Symbol | |
|---|
| ID | 7088600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4146382 |
|---|
| End bp | 4147344 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643462371 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_002359392 |
|---|
| Protein GI | 217974641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAT CAATACGTAA AATAGTTAAT TGGAAGCAAT ACAACCAAGC GTTAGTGAAC
CGTGGTTCGC TCACCTTCTG GGTGGATGAA GCTGCAGTAA AAGCGTGGTA CTGCAATGAG
CATCATGGCG GGCGTGGTCG CGGTTTTAGC TATAGTGATG TGGCGATTGA AACCGCGTTG
ATGATCAAAG GCATCTTTAA TTTATCGTTG CGTGCGCTAG AAGGCTTTCT CAACTCTTTG
TTTACGTTGA TGAGTGTGCC ACTTAAATCT CCCGATTACA CTTCTATCAG TAAACGCGCT
AAGACAGTCA ATATCAAGTA CCGCAACCCC AGTCGCGGAC CGATAGCGCA TGTTGCTGTC
GATGCCACGG GCCTGAAAGT GTTTGGTGAA GGCGAATGGA AAACGCGCAA GCATGGCAGC
GAAAAACGCC GCACATGGCG CAAGTTGCAC TTAGCCATAG ATGCAAGCAC TCACGAAGTC
GTTGCAGCTG AAGTCAGTGT TGTGTCAGTA GGCGATAATG AAGTACTGCC GACTTTACTC
AATCCTTTAC GGCGAAAGAT AACGCAGGTA TCGGCAGATG GGGCTTATGA TACAAAGGGT
TGTTATCAAT TACTGCGACG TAAAGGCTGC AAAGCTACCA TCCCACCGCG CTCAAATGCG
GGGTTATGGG AAAAGGGGCA TCCACGCAAT GAAGCGGTAG AAGCACTGAA AGCGGGTCAG
CTGAAACAAT GGAAAATCGA TAACGGCTAT CACCAGCGCT CTCTAGCAGA GACCGCCATG
GGCCGATATA AACAGTTGAA TAGTCCAATG CTAAGTTTAC GTGATTACAA TGGGCAAGTT
GCAGAGGCAT TGGCTGGTGT GAAGGCGATG AACAAAGTCA TTAGACTGGG TATGGCCGTT
CGCCAGCAAG TTGCTTATTC GGGCAGAAGT CTTGGAACGA TTACGTTCTA TGAAATGATT
TAA
|
|---|
| Protein sequence | MGKSIRKIVN WKQYNQALVN RGSLTFWVDE AAVKAWYCNE HHGGRGRGFS YSDVAIETAL
MIKGIFNLSL RALEGFLNSL FTLMSVPLKS PDYTSISKRA KTVNIKYRNP SRGPIAHVAV
DATGLKVFGE GEWKTRKHGS EKRRTWRKLH LAIDASTHEV VAAEVSVVSV GDNEVLPTLL
NPLRRKITQV SADGAYDTKG CYQLLRRKGC KATIPPRSNA GLWEKGHPRN EAVEALKAGQ
LKQWKIDNGY HQRSLAETAM GRYKQLNSPM LSLRDYNGQV AEALAGVKAM NKVIRLGMAV
RQQVAYSGRS LGTITFYEMI
|
|---|
| |