Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3465 |
Symbol | |
ID | 7086079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4120654 |
End bp | 4122648 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462351 |
Product | transketolase |
Protein accession | YP_002359372 |
Protein GI | 217974621 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0633965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCC GTAAAGTACT CGCAAACGCA ATCCGTGCGT TAAGTATGGA TGCAGTTCAA AAAGCAAATT CAGGCCATCC CGGCGCCCCA ATGGGTATGG CAGATATTGC TGAAGTGCTG TGGAATGATT TCCTTAAGCA CAACCCGACC AATCCTAAAT GGGTAGATAG AGACCGTTTC GTCCTTTCTA ACGGTCACGG TTCAATGCTG ATCTACTCTT TACTTCACCT GACAGGTTAT GAATTACCAA TCGAAGAGCT GAAACAGTTC CGTCAATTGC ATTCAAAAAC CCCGGGTCAC CCAGAATACG GTTACACCCC AGGTGTTGAA ACCACAACGG GTCCACTCGG CGCGGGCATC AGCAATGCTG TCGGTATGGC GATTGCTGAA AAAACCTTAG CGGCACAGTT TAACCGTGAT GGTCACGATA TCGTTGATCA CTACACTTAC TGCTTCGTCG GCGACGGCTG TTTGATGGAA GGTATTTCCC ACGAAGCCTG TTCATTAGCC GGTACTTTAG GTCTAGGCAA ACTGGTCGCA TTTTGGGATG ACAACGGTAT TTCTATCGAT GGCCATGTTG AAGGCTGGTT CACCGATGAT ACGCCAAAGC GTTTTGAAGC TTACGGCTGG CATGTGATTG CCGGTGTTGA CGGTCACGAT AGCGCGGCAA TCCGTGCTGC TATCGAAGCG GCGAAAGCTG TGACCGATAA ACCAACCATG ATTTGCTGCA AAACCATTAT CGGTTTTGGC TCACCCAACA AATCTGGCAG CCACGATTGC CACGGCGCGC CATTAGGCGA TGCGGAAATC GCAGCTGCCC GTGAATTCCT TTGCTGGCCA TACGCCCCAT TTGAAATCCC TGCTGACGTT TATGCCGGTT GGGATGCCAA AGAAGCCGGT GCTGCCCGTG AAGCGGCATG GAACGAGAAG TTTGCGGCTT ACAGCGCAGC TCACCCAGAA CTGGCTGCTG AATACGAGCG CCGCGTACTG AAAGGTGAAT TACCTGCTGA TTTTGAAGAA AAAGCGCAGG CATTCGTGCA AGCATCACAG GACAAAGCCG AAGGTATTGC GAGCCGTAAA GCCTCACAAA ATGCCATCGG TGCTTTCGGT GCTATGTTAC CTGAACTGTT AGGCGGCTCT GCTGACTTAG CGGGTTCTAA CTTGACACTG TGGTCAGGTT CTAAAGGTAT TCAAGACGAT CCTGCCGGTA ACTACATTTA CTACGGCGTG CGTGAATTCG GCATGAGCGG CATTATGAAC GGTGCTTCGC TGCATGGTGG TTTCATCAAT TACGGCGCAA CTTTCATGAT GTTCATGGAA TACGCACGTA ACGCAGTCCG CATGTCGGCG CTGATGGGCA TTCAAAACAT CTTCGTTTAT ACCCATGACT CTATCGGTCA AGGTGAAGAT GGTCCAACGC ATCAGCCAGT TGAGCAATTA GCTAACCTGC GTATGACGCC AAATATGGCT GTATGGCGCC CATGTGATGC GGCAGAAACG GCGGTTTCTT GGAAAGCTGC GATTCAACGT CGCAATGCGC CAACGTCACT GATTTTCAGC CGTCAAAACC TCAAAGCCCA AGCGCGTACC GCTGAGCAAT TAGCCAACGT GGCTAAAGGT GCTTATGTAC TGCAAGACTG TGCGGGTACA CCAGAACTGA TCCTGATCGC AACCGGTAGC GAAGTACAAT TGGCGATGGA TTCTGCGGCT GCATTAACTG AGCAAGGTAA ACAAGTTCGC GTAGTCTCTA TGCCATCGAC AACTGAGTTC GATAAGCAAG ATGCAGCGTA TAAAGAATCG GTATTACCAC GCGCTGTGAC TAAACGTGTG GCTATCGAAG CGGCGCATAC CGATTTCTGG TACAAGTACG TCGGTTTTGA AGGCACTGTT GTTGGCATGA CCACTTTTGG TGAGTCGGCG CCGGGTAACG TGCTATTGAA TCACTTCGGT TTCACCGTTG AAAATGTGCT GAATGCTGCA AAATCATTGG GCTAA
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Protein sequence | MSSRKVLANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNDFLKHNPT NPKWVDRDRF VLSNGHGSML IYSLLHLTGY ELPIEELKQF RQLHSKTPGH PEYGYTPGVE TTTGPLGAGI SNAVGMAIAE KTLAAQFNRD GHDIVDHYTY CFVGDGCLME GISHEACSLA GTLGLGKLVA FWDDNGISID GHVEGWFTDD TPKRFEAYGW HVIAGVDGHD SAAIRAAIEA AKAVTDKPTM ICCKTIIGFG SPNKSGSHDC HGAPLGDAEI AAAREFLCWP YAPFEIPADV YAGWDAKEAG AAREAAWNEK FAAYSAAHPE LAAEYERRVL KGELPADFEE KAQAFVQASQ DKAEGIASRK ASQNAIGAFG AMLPELLGGS ADLAGSNLTL WSGSKGIQDD PAGNYIYYGV REFGMSGIMN GASLHGGFIN YGATFMMFME YARNAVRMSA LMGIQNIFVY THDSIGQGED GPTHQPVEQL ANLRMTPNMA VWRPCDAAET AVSWKAAIQR RNAPTSLIFS RQNLKAQART AEQLANVAKG AYVLQDCAGT PELILIATGS EVQLAMDSAA ALTEQGKQVR VVSMPSTTEF DKQDAAYKES VLPRAVTKRV AIEAAHTDFW YKYVGFEGTV VGMTTFGESA PGNVLLNHFG FTVENVLNAA KSLG
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