| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3449 |
|---|
| Symbol | |
|---|
| ID | 7086063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4097988 |
|---|
| End bp | 4098890 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643462335 |
|---|
| Product | tyrosine recombinase XerD |
|---|
| Protein accession | YP_002359356 |
|---|
| Protein GI | 217974605 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTAAGA CATACCAGCC CGATCCGCTC ATTGATGTTT TTCTTGATGA TCTTTGGTCG
AGCAAGGGAC TGAGTGACAA CACCTTATCG GCCTATCGCA CCGATTTGCG CCATTTTGAT
CGTTATCAAG GTCAGCAAGG GGTAACGCTG CTCGCGGTTT CTCAGGCCGA TGTCAGAGCG
TATTTAGCCT TTAGAGTTGA GCAGGATTTT GCGCGCACCA GTAGCGCTCG GCTGCTCAGT
AGTTTACGGC GTTTCTATAC CTATTTAGTG CAGACCAAGC AGATTTTAGC CGATCCTATG
GCCCTAGTTG AGTCGCCTAA ATTAACCCGC CATTTACCCG ATTCATTGAG TGAATCGCAG
GTCGATCGCT TGTTGTCTGA GCCCAATGTG GAAGATGCGG TCGAATGTCG TGACAAAGCC
ATGCTAGAGC TGTTGTATGC GACAGGCTTG AGGGTGAGCG AGCTCGTTGG CTTGACTATG
GAGCAGATGA GCCTGCGCCA AGGTTTAGTG CGCATTGTGG GTAAGGGTGG TAAAGAGCGT
CTCGTGCCGC TGGGTGAATT AGCGATTACA GAGGTTGAGA ACTACATGAA GTTTGCGCGG
CAAGAGTTGC TTGGCAATAA ACAATCCGAT GTGGTGTTTC CGTCAAAACG CGGGCAGATG
ATGACGCGGC AAACCTTTTG GCATCGGATT AAGCTGTATG CCCTGCGTGC TGGGATTGAA
ACCGCATTAT CACCGCACAC ATTACGCCAT GCTTTTGCTA CCCATTTGCT CAATCACGGT
GCCGATCTGC GGGTGGTGCA ATTGCTGTTA GGCCATAGCG ACCTGTCGAC CACGCAGATT
TATACCCATG TGGCGCGGGC AAGATTGCAG GAATTGCATC AACAGCATCA TCCAAGAGGC
TGA
|
|---|
| Protein sequence | MPKTYQPDPL IDVFLDDLWS SKGLSDNTLS AYRTDLRHFD RYQGQQGVTL LAVSQADVRA
YLAFRVEQDF ARTSSARLLS SLRRFYTYLV QTKQILADPM ALVESPKLTR HLPDSLSESQ
VDRLLSEPNV EDAVECRDKA MLELLYATGL RVSELVGLTM EQMSLRQGLV RIVGKGGKER
LVPLGELAIT EVENYMKFAR QELLGNKQSD VVFPSKRGQM MTRQTFWHRI KLYALRAGIE
TALSPHTLRH AFATHLLNHG ADLRVVQLLL GHSDLSTTQI YTHVARARLQ ELHQQHHPRG
|
|---|
| |