| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3421 |
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| Symbol | |
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| ID | 7086035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4063515 |
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| End bp | 4067792 |
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| Gene Length | 4278 bp |
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| Protein Length | 1425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643462307 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002359328 |
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| Protein GI | 217974577 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAAC TTCGAATTGA TGACCAAGTG TTATCGGTTA ACTCGACCGA TAACCTACTG
CAAGCGGCAC ATGCCGCGGG CATAGCCATA CCCAGCTTAT GTGATCCCAG CGCAGCCTCG
CAGCAATTAG GCACTCATGC ACACACTCAC GCACAAGCAG ACAAGCAAGC CTGCAATTTG
TGTGTCGTCC AAATTGAAAA TGCCGATGCC AGTTTGCGCT GCGTACGCGC CTGCGAAACG
CTGGTCGCAG CGGGCATGCG GGTGATAACT CAGTCCGAAT GGTTAAGTCA ACAGCGCAAA
CAAGCACTGA CAGCGATCTT GAGCGATCAC TTCGCCGATT GTGAAGCCCC CTGCCAACAG
GCATGCCCTG CGGGCGTCGA TGTGCAGAGT TACCTGTATC ACATCGCCCA AGGCAACCAT
ACCGAAGCCG TTAAAGTCAT TAAACAAACC TTGCCACTGC CGCTATCTAT TGGCCGAGTT
TGCCCCGCTT TTTGTGAGGC ACAATGTCGC CGTGGGCTAG TCGATGAGCC CATCGCTATT
CGTCAATTAA AACGCCACGC CGCTGATCTC GATCTCGCCG ATGGCGAAAA GGGCGGCACG
AGTTATGTGC CGCCACGCCA ACCCGACACG GGCAAAAAAG TCGCGATTAT TGGAGCGGGC
CCAGCAGGAT TAAGTGCAGG ATATTACTTA TCAAACCAAG GCCATAGTGT TGAGATATTC
GAATCTATGC CACAGGCTGG TGGCTGGCTG CGCTATGGTA TTCCTGAGTA TCGTTTACCT
AAGGCGATAC TCGATAAAGA AATCGCACTC TTGTGCCATA ACGGCTTAAC CATACACACA
GAAACACGTC TCGGCCATGA GGTGCATTTA AATCAATTAG TTGAAGATTT CGATGCCGTC
TGTCTTGCGA TCGGCGCCCA AAAAGCCGTG CCTATGGATT ATCCCGGCAG CACGCTCAAA
GGTTGTTACT TAGGCGTTGA TTATTTAAAA GATCATTGCC TAGACCAGAC ATTTATCCTA
GGCAAAAAAG TCGCCGTCAT TGGTGGCGGC AATACTGCTA TCGATTGCGC CCGCACTGCG
GTGCGTGAAG GCTGCGATGT CACCTTAATT TACCGCCGCA CCCGCGCAGA AATGCCCGCC
GAAGCTTACG AAGTACACGA GGCCGAAGTC GAAGGGGTGA AATTTCATTT CTTAACCAAC
CCAATTGAAA ACCATAGCGA TACGCAAGGC AGAGTCCACG CCGTCACCTT TGCCAAAATG
GCGCTCGGCG AAGCCGATGC CTCGGGCAGA CGCGCTCCCG TTGATACTGG TGAAACCTTT
ACCCAAGATT TTGATACTGT GATAGCCGCA GTATCGCAAA CTCCCGATAT GAGTTTTATG
CAAGATCCCG CCAGTCCTTT AAGCCAAGGC ACACTTGCCC TCAGCCGCTG GAATACCTTC
ATTGGCTGCG AGCACACTAT GTCATCCGGG GTTGAAAAGC TCTTTGTGGT GGGCGATGCG
CGCCGCGGTC CTGCCACCGC AGTTGCCGCC ATAGGTGATG GCCATAAAGC CGCCATCGCC
ATAGATAAAT TACTCAAACA AGGCCTAAGT TGCGATCTGC ATGCCAATGC ATTTAATTCC
GCTAAAGCCA TCAGCAAAGC GGTGACACAA AACTTGCCCG CAACCGATCT TTATCCCGCC
GTACCGCGTA AAGCCCGTTT AAGTATGCCC GAGCTGAGTG CGATGCAGCG TTTACTCAAT
TACGGCGAAG TCGAGCTAGG CTTTGCTCCC GATGCCGCGA TGCAAGAAGC GGCGCGATGC
CTTGAATGCG CCTGCCAAGC CAATACTGAT TGTAAATTAA GGGACTATGC GACCGACTAC
CATGTCGAAC CTAAGTCACT CAGCACCCAA AGCGCGCGTA AGTTTTCGGT CGATAAATCG
AGTCCGTTCA TTCAATTTGA TGCGAATCGC TGCATTAGCT GCGGTAAGTG CGTTGATGTG
TGCCAGTTGC AGAGTGGCCA TTGTGCGATT CAATTTGCCC ATGATTCCTA TCAAGCACTG
CCGCAAGACC TAAGCGAAAC CATCGAACGC CGCGCACCGA GAGTCGGCTT TAGCGCCAGC
ATGGCCGACA GCAAATGTGT GCAATGCGGT AACTGTGTGC AGGTTTGCCC AACGGGCGCG
CTCGTCGATG CGCGGGATAA ACGCCAAGGC GATGAAACGC CACTCAAAAC CGCCTCAACG
ATTTGTACCT ATTGCGGCGT AGGCTGTCGG CTTGACCTTA AAATTGATGC CAGCACTAAT
CAGATCCGTC ATATCGAGGG CAACAAAGAG TCTGTGGTTA ACCAAGGCAT GCTCTGTGTC
AAAGGGCGAT TTGGCTTCGA TTTTCTTCAC AGTGAAAAAC GCCTCACCAC GCCACTCATT
CGTAAAGATG GTCAGCTCAC GCCAAGTAGT TGGCCTGAAG CCATCGCCTA TGTAGCCGAA
CATTTACAGC AAATAAAACA GCAACATGGC AGTAATGCAC TGGCAAGCTT GGCCTCGGCA
AAAGCCACCA ATGAAGAAAA CTTCCTGCTG CAAAAATTTG TCAGAAGCAT ACTCGGCACC
AATAACATCG ACCACTGCGC CCGTCTGTGT CATTCATCTA CGGTAACAGG CCTGCAGCAG
AGTATTGGTA GTGGCGCTAT GACCAATGAC ATTCCGAGCA TTCAAGCATC GGATGTAATT
TTTATCATAG GCTCAGACAC CAGCAGTGCT CACCCGATCA TCGCCTCGAA AATCAAACAA
GCCGTGGCTT TGCATGGTGC AAAATTAATG GTGGCCGATC CTAAACGTGT CGCCATTGCC
GACAGTGCAC ACCTTTATGT CGCCCACAGA CCCGGCACTG ACGTCATGTT ACTCAATGCG
ATTATGGCGG AAATCATCCG CAACGACTGG CAGGATAAAA GCTACATCGC CGCGCGCACC
GAAGGCGTGA ATGCCCTCTA CGCTGAACTC GCAAAAGCAG ATTACAGCCT AGAAAACGCG
GCCTTGATAA CCGGCGTTAA AGCCGAAGAT ATCGCCTGTA TCGCCCGCAC CATAGGCACG
GCCGAAAAAA CCGCAATCTA CTATGCTATG GGCATTACCC AGCACACGAC GGGACACGAC
AATGTCACTG CCATATCCAA TCTACAACTT CTGTGCGGCA ATATTGGGGT TGAGGGTGCG
GGGATTAACC CACTGCGGGG ACAAAGTAAT GTGCAAGGTG CCTGCGACAT GGGCGCACTG
CCTAACTTCT TCAGTGGCTA CCAAAAAGTC ACCGACATTC ATGCCAGAAT GCGTTTCGAG
GCACATTGGC AAACGCCGTT ATCGGCGGAG ATTGGCGTAA CCGCAACCCA CATGATGCAT
GATATTTCCA AAGGGTACAT TAAAGCTTTG TATGTGATGG GCGAAAACCC CGTATTGAGC
GATCCTGACC AAGCCCATGT GCTTAGGGCC CTTAACGCTA TCGACTTTTT AGTGGTGCAG
GACATCTTCC TCACCGAAAC CGCCGAGCTT GCCGATGTGG TTCTGCCCGC CGCCGCGTTT
GTCGAAAAAC GCGGTCATTT CACTAATACA GAACGGCGAG TGCAGCGACT CGAACAGGCC
CTTTTACCGC CAGGCGAAGC CCTGCCAGAT TGGCAAATTG TCCAAGCCAT TGCCAATGCG
ATGGGCGCCG CTTGGGATTA CCCCAATGAA GAAGCGATTT GGCAGGAAAT CAATGAGCTA
ACACCACAAT ATCGTGGTAT TACTTGGCAG CGATTAAGCA CTGGAGATGA TGGCAAAATT
CCCCAAGGCA TTCAATGGCC TTGTCCAGAT GCAACCCATC CAGGAACGCC CATCATGCAC
CAAGGTCAAT TCACCCGCGG CTTAGGCAAG TTTACGCCTG TGAGTTATCG CTTACCTGCG
GAAATGCCCT GCAGTGAGTA CCCGCTCACC CTCTCAACCG GACGTTTACT GGAACAGTTC
CACACAGGCA CCTTAACCCG TAAAACAGCG GGGCTCGACT TACTCGGCTC GCCTAAAGTG
ATGATTTCAG TCTATGACGC TGAGCAACTC GGGATAGGCA ATGGCGATAA AATCAAACTC
ACTACCCGTC GCGGCGAAAT TGAAATCGAC GCCTTTGTGA CGAAAAGAGC CCAAGCTGGC
GTGCTATTCC TGCCCTTCCA TTTTGTTGAG GCTGCTGCGA ATAAACTCAC CATCAATGCG
CTCGATCCTG TGGCCTTTAT CCCAGAATAT AAGGTCTGCT CGGTGAGGGT AGAACGGGTT
GCCGAGAAGA TTGATTAA
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| Protein sequence | MIELRIDDQV LSVNSTDNLL QAAHAAGIAI PSLCDPSAAS QQLGTHAHTH AQADKQACNL
CVVQIENADA SLRCVRACET LVAAGMRVIT QSEWLSQQRK QALTAILSDH FADCEAPCQQ
ACPAGVDVQS YLYHIAQGNH TEAVKVIKQT LPLPLSIGRV CPAFCEAQCR RGLVDEPIAI
RQLKRHAADL DLADGEKGGT SYVPPRQPDT GKKVAIIGAG PAGLSAGYYL SNQGHSVEIF
ESMPQAGGWL RYGIPEYRLP KAILDKEIAL LCHNGLTIHT ETRLGHEVHL NQLVEDFDAV
CLAIGAQKAV PMDYPGSTLK GCYLGVDYLK DHCLDQTFIL GKKVAVIGGG NTAIDCARTA
VREGCDVTLI YRRTRAEMPA EAYEVHEAEV EGVKFHFLTN PIENHSDTQG RVHAVTFAKM
ALGEADASGR RAPVDTGETF TQDFDTVIAA VSQTPDMSFM QDPASPLSQG TLALSRWNTF
IGCEHTMSSG VEKLFVVGDA RRGPATAVAA IGDGHKAAIA IDKLLKQGLS CDLHANAFNS
AKAISKAVTQ NLPATDLYPA VPRKARLSMP ELSAMQRLLN YGEVELGFAP DAAMQEAARC
LECACQANTD CKLRDYATDY HVEPKSLSTQ SARKFSVDKS SPFIQFDANR CISCGKCVDV
CQLQSGHCAI QFAHDSYQAL PQDLSETIER RAPRVGFSAS MADSKCVQCG NCVQVCPTGA
LVDARDKRQG DETPLKTAST ICTYCGVGCR LDLKIDASTN QIRHIEGNKE SVVNQGMLCV
KGRFGFDFLH SEKRLTTPLI RKDGQLTPSS WPEAIAYVAE HLQQIKQQHG SNALASLASA
KATNEENFLL QKFVRSILGT NNIDHCARLC HSSTVTGLQQ SIGSGAMTND IPSIQASDVI
FIIGSDTSSA HPIIASKIKQ AVALHGAKLM VADPKRVAIA DSAHLYVAHR PGTDVMLLNA
IMAEIIRNDW QDKSYIAART EGVNALYAEL AKADYSLENA ALITGVKAED IACIARTIGT
AEKTAIYYAM GITQHTTGHD NVTAISNLQL LCGNIGVEGA GINPLRGQSN VQGACDMGAL
PNFFSGYQKV TDIHARMRFE AHWQTPLSAE IGVTATHMMH DISKGYIKAL YVMGENPVLS
DPDQAHVLRA LNAIDFLVVQ DIFLTETAEL ADVVLPAAAF VEKRGHFTNT ERRVQRLEQA
LLPPGEALPD WQIVQAIANA MGAAWDYPNE EAIWQEINEL TPQYRGITWQ RLSTGDDGKI
PQGIQWPCPD ATHPGTPIMH QGQFTRGLGK FTPVSYRLPA EMPCSEYPLT LSTGRLLEQF
HTGTLTRKTA GLDLLGSPKV MISVYDAEQL GIGNGDKIKL TTRRGEIEID AFVTKRAQAG
VLFLPFHFVE AAANKLTINA LDPVAFIPEY KVCSVRVERV AEKID
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