| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3419 |
|---|
| Symbol | lysS |
|---|
| ID | 7086033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4060346 |
|---|
| End bp | 4061848 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462305 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_002359326 |
|---|
| Protein GI | 217974575 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.535831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC AAGTAATTGA TGAGAACAAA CTGATCGCCG AGCGCCGTGC CAAGCTAGAA
AGCATCCGCC CAAATTGTAG TGCTAATGCC CATCCAAATA CCTTCCGTCG CACCCATAAA
GCGGCTGAAT TACAAGCACA GTATGGTCAA AACACTAAAG AAGAACTCGA AGCCTTAGGT
TTTAAGACCA GCATTGCTGG CCGCATCATG GCAAAGCGTG GCCCTTTCTT AGTGATCCAA
GACGTGTCTG GCCGTATTCA AGCCTATGCT GAAAAAAGCG TACAAGCTGA TTTGAAAGAG
CGTTTTCAAG GTCTGGATAT CGGTGACATT ATCGGTGTAA CCGGTCAGCT GCATTTGTCT
GGCAAAGGCG ACTTATACGT CAACATGGAA CAGTACGAGC TACTGACCAA GGCGCTGCGT
CCATTGCCTG CGGACTATTA TGGTCTAGCC GATCAAGAAA TGCGCTACCG TCAACGTTAC
GTGGATCTGA TCGTTAACGA AGATTCACGC AATGCCTTTA TCATGCGTTC TAAAGTGGTT
TCTGCAATCC GTAACTTCAT GATCAAAAAA GAGTTCATGG AAGTTGAAAC CCCTATGATG
CATGTGATCC CTGGTGGTGC TTCGGCCCGT CCTTTCATCA CTCATCACAA CGCCTTAGAC
ATGCCAATGT ACCTGCGTAT CGCGCCAGAA TTATATCTGA AGCGTTTAGT GGTTGGTGGT
TTTGAGCGTG TGTTCGAAAT CAATCGTAAC TTCCGTAACG AAGGTCTGTC GCCACGTCAT
AACCCAGAAT TCACTATGAT GGAATTCTAT ATGGCTTATG CAGACTACAA AGATCTGATG
GACTTAACCG AAGAAATGCT CAGCTCGATT GCTATCGAAC TGCTTGGCAG TGCGCAAATG
CCCTACGGCG AGCACACAGT CGATTTCGGT GGCCCATACG CACGTTTAAG CATGTTAGAA
GCGATTCAGA AGTACAATCC TGATAACGCG ACTATCCAAG CTATGACCTA TGAGCAAGTG
AAAGATGTTG AATTCATGCG TGATTTAGCG AAAAGCTTAG GAATGAAGAT TGAAAAGTTC
TGGACTTGTG GTCAGCTACT TGAAGAAATC TTCGGTGAAA CCGCTGAATG GCAATTGATG
CAACCGACGT TCATCACTGG CTACCCTGCG GACATTTCAC CACTGGCACG TCGTAACGAT
GACAACCATT TCATCACTGA CCGTTTCGAA TTCTTCATCG GTGGCCGCGA AGTGGCTAAC
GGCTTTAGCG AGCTGAACGA TGCTGAAGAT CAAGACAACC GCTTTAAAGC GCAGGTTGAC
GCGAAAGATG CTGGCGACGA TGAAGCTATG TTCTACGATG CAGACTATAT CACTGCACTG
GAACACGGTT TACCACCAAC GGCAGGTCAA GGTATTGGTA TCGACCGTTT AGTGATGTTG
TTCACTAACA CTCATACTAT CCGTGACGTG ATCCTGTTCC CAGCGATGCG CCCACAGGCG
TAA
|
|---|
| Protein sequence | MTEQVIDENK LIAERRAKLE SIRPNCSANA HPNTFRRTHK AAELQAQYGQ NTKEELEALG
FKTSIAGRIM AKRGPFLVIQ DVSGRIQAYA EKSVQADLKE RFQGLDIGDI IGVTGQLHLS
GKGDLYVNME QYELLTKALR PLPADYYGLA DQEMRYRQRY VDLIVNEDSR NAFIMRSKVV
SAIRNFMIKK EFMEVETPMM HVIPGGASAR PFITHHNALD MPMYLRIAPE LYLKRLVVGG
FERVFEINRN FRNEGLSPRH NPEFTMMEFY MAYADYKDLM DLTEEMLSSI AIELLGSAQM
PYGEHTVDFG GPYARLSMLE AIQKYNPDNA TIQAMTYEQV KDVEFMRDLA KSLGMKIEKF
WTCGQLLEEI FGETAEWQLM QPTFITGYPA DISPLARRND DNHFITDRFE FFIGGREVAN
GFSELNDAED QDNRFKAQVD AKDAGDDEAM FYDADYITAL EHGLPPTAGQ GIGIDRLVML
FTNTHTIRDV ILFPAMRPQA
|
|---|
| |