| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3403 |
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| Symbol | |
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| ID | 7086017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4038236 |
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| End bp | 4038829 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643462289 |
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| Product | membrane lipoprotein lipid attachment site |
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| Protein accession | YP_002359310 |
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| Protein GI | 217974559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00726225 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT TTAAACTGAT TTTTGTGCTG GCTGCCGTTA TGGGTCTGGC TGCATGTCAA
TCTAAAGTCG AATATGGCGA TGCCACCGAA GTTGAAACCG TCAATGAGAA CTTTGGCTCA
ACGGATCTAC AAGCTATTGC AGCCAAGATG GTGGATAGCA TGATGACTTT CCCTCCTATC
GTGGCCATGA CAGCCAATAG CCGTCCGATT TTATTTGTCG ACAGCATCAA GAACAAAACC
TCAGAGCATA TTGATACTGA GTCTGTTACT GACTCTATCA GCAACAAACT TTTGCGCTCA
GGCAAGTTCC GTTTTATCGA CATGACTAAA GTAGATTCAG TCCGTAAGCA ATTGGATTAC
CAAAACAATA CTGGCATGGT TGATCCATCA ACCGCCATCA AGTTTGGTCG TCAAATCGGC
GCGCAATACA TGTTATACGG CAATTTATCT AGCATAGTTA AGCAAGACGG TAGCACTAAA
GACGTGTACT ACAAGATGAC AATGCGTTTA ATGGATTTAG AAACAGGCCT GATCGAATGG
TCTGATGAAA AAGAAATCCG TAAGATGAAG TCTAAGTCTT TCTTAGGCAT GTAA
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| Protein sequence | MKQFKLIFVL AAVMGLAACQ SKVEYGDATE VETVNENFGS TDLQAIAAKM VDSMMTFPPI
VAMTANSRPI LFVDSIKNKT SEHIDTESVT DSISNKLLRS GKFRFIDMTK VDSVRKQLDY
QNNTGMVDPS TAIKFGRQIG AQYMLYGNLS SIVKQDGSTK DVYYKMTMRL MDLETGLIEW
SDEKEIRKMK SKSFLGM
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