Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3401 |
Symbol | |
ID | 7086015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4036206 |
End bp | 4036763 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462287 |
Product | peptide deformylase |
Protein accession | YP_002359308 |
Protein GI | 217974557 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000135447 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC ATTTGATGCC AAAACAAACC CCGCCTTTAT TACCCATAGC GTTAGTGGGT GAAGCTATCC TAGGGCGGAC TGCAATTGCA GTGCATCATT TCGATGCCGA GCTCGCGCAC CTTGCAGAGC AAATGTCTGC CAGCATGGAA GCCGCCAAAG GCGTTGGCAT CGCGGCGCCA CAGGTTCACA GTCCCTTAGC TTTATTTATT ATGGCTTCTC GCCCAAATGA GCGTTATCCA GACGCACCCA ATATGGCGCC TGTGGTCGTG GTTAATCCGC AAATCATTCA TGCATCGAGT GACTTAGTCG GCGGCGAAGA AGGTTGCCTT TCCGTTCCCG GCCAAAGATT TAACATACTA AGACATCAAG CCATTGAAGT GCGCTACCAG AATTTACAAG GCGAGTGGCA ACAGGCCGAA TTAACAGGCT TTATTGCGCG GATTTTTCAA CACGAATTTG ATCACCTGCA AGGGATCACC TTACTCGAGC GCTCACGTAT GCCTGAACAG GCTCAGTCGA TTTCAGCCCA GTCCATCGAA CAAGGTGAAG CGCAATAA
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Protein sequence | MFKHLMPKQT PPLLPIALVG EAILGRTAIA VHHFDAELAH LAEQMSASME AAKGVGIAAP QVHSPLALFI MASRPNERYP DAPNMAPVVV VNPQIIHASS DLVGGEEGCL SVPGQRFNIL RHQAIEVRYQ NLQGEWQQAE LTGFIARIFQ HEFDHLQGIT LLERSRMPEQ AQSISAQSIE QGEAQ
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