| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3385 |
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| Symbol | |
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| ID | 7087211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4016824 |
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| End bp | 4017552 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643462271 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002359292 |
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| Protein GI | 217974541 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTTG CAAAATACCT CGCCCAGTGT GGCATAGGCT CACGCCGTGA AGCCTGCCGT
TTAATTGAGG CCGGACGCAT TACACTCAAT GGCCATATCG CCCGCCACAC AGATCCCATC
CGTTTAGGCG AGTCATTAAA TTGCCTCGAC AATATTGAGC TTGATAGCGC ACCCATCACA
AAAACCGAAA CCCTCTCCTA CTGGATATTG AACAAAGCCG TAGGCACAGA TTGCCGCCTG
CTTGAGCAGG ATGAAACGAG TCTCATACAC CTGCTTCCCA AAGCCCCAAG ACTCTATCCC
GTCGGCAGGC TCGATAAAGA TTCCCGCGGC CTACTGCTGT TAACTAATGA TGGCGAGCTG
ACCCATAAAC TCATGCACCC CAGTTTTGCC CATAGCAAAA CCTACCATGT GCGCCTCAAC
CGACCATTCA CTGATGATTT TGTTGAACAG ATGGCCAGTG GAGTACGTTA TAAAAACCTA
CAAACCCTGC CCTGCCAAGT CCGCCGTCTC AGTTCGGACA GCTTTGAAAT CGTACTGATA
CAGGGCTTAA ATCGCCAAAT TCGTAGGATG TCCAAGGCGC TCGGATATCA CGTTATCGAT
CTTGAGCGCG TCGCCATAAT GACACTAAAT TTACGCGAAT TAGCATTGGG TGAGTTACAA
GAAGGTCAAA TGCGGCGATT AACAGAATCG GAAGTTGCAG AGCTAAAAGC AGTACTGGCG
ATGAAATAA
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| Protein sequence | MRLAKYLAQC GIGSRREACR LIEAGRITLN GHIARHTDPI RLGESLNCLD NIELDSAPIT
KTETLSYWIL NKAVGTDCRL LEQDETSLIH LLPKAPRLYP VGRLDKDSRG LLLLTNDGEL
THKLMHPSFA HSKTYHVRLN RPFTDDFVEQ MASGVRYKNL QTLPCQVRRL SSDSFEIVLI
QGLNRQIRRM SKALGYHVID LERVAIMTLN LRELALGELQ EGQMRRLTES EVAELKAVLA
MK
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