| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3373 |
|---|
| Symbol | |
|---|
| ID | 7087199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3998561 |
|---|
| End bp | 4001758 |
|---|
| Gene Length | 3198 bp |
|---|
| Protein Length | 1065 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462259 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002359280 |
|---|
| Protein GI | 217974529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTAA AGGATGATGT CGCCCAACTA AAAGCTGAGC TGGCACAATT ACAATCGCTG
CATTTATCGC AGCAATCTTC ACTCAGCCGC CAGTTGGCAG AATTTTCAAC TAAGCTCGAT
ACCTTAAGTC AGCAAATTAC GACTGAAGAC GCCGCTGATA CCACGGTCAG TATGGCAGCG
GGTGCTGCAT CGATTGCGGC AGTGGTCCCC GCCGCCGATA ACGCGCCCAC ATTAACCCAT
GCGGCACACA CACCAATCCT TGAGTCCGCT CCCGTAGCGC CAGTTCCTGC AGAACCCAAC
CCATGGCAGC AAAACGCTGT GCAAGGAGAC CCTTGGCAAA GAAACACAAA AAATACCTCA
GCAGAACAAG TCGCTAAAAC CGAATACCAG GCGCAGGGCC AACAACTGAG TGATGAAGTC
AAATTACAGG CAAGCGTGCA AGTGGCGAGT CAATTTGATG ATCTGCTATC CCAAGGATTA
GCGGCCATCA TGGCGCCCTT TGGCGCAATT ACCGAACAAA TCAAATCCTT CTACCATCAT
TATCAAGCTA AGGGATTAGG GCCAGTCTTC TTGATGACAG TTGCAGGGAT CATCACCCTG
ACCTTAGGCT TTGGTTATTT ACTGCAATAT TCCATCAACC ATTGGTTCTC TGAACTGGGC
AAAGCCCTAC TCGGGTTTGC CAGTGCGAAC GCTATCATAG CTGGCGGAAT TTTTATTCGC
CAAAAACGTG CGGGCATGGC GGACTTTGGT TCAGGGATAA TCGGATTAGG CCTTATCCTA
AACTTTCTCT GCGCTTACTT TATTGGGCCA TATTTTGAAA TCATCCCCAA TAGCGCGAGT
TTTATCTTAC TGTTATTGAT CACTTTGGCA GGTTATGGCC TGTCAATGCG CTTAGATGCC
AAAGTCATTG CCGTCATTGC CTTAGTCGGC GGCTCGACCG CGCCAATGAT GCTGTTATCC
CAAAGCTATG CGCCGCTACT GTATCTTCCT TATTTACTGC TTATTGGAAT TGGCGCCCTT
GCCCAGAGTC GTAAGCTAAA GTGGCCGTTA TTAGTGGAAA TCACCGCCCT GCTGCACATT
GGCTGCATCG AAGCCTTTAG CTATTTTGTG CCATTGCCAC TCACCGACTT TGGCGGTGGC
AGTCTGCTGG CGCTTATCAG TATTAATGCG ACCTTTTATC TCTACGGCAT TACTGGCTTA
ATATTTACCA AGCAGTTTAC CCATCAAGAT AAACAACCAA GCAATACGCT GAGCCATCGC
ATGCTCGCTC TGCCGATTGC ATTGCTCGCC TTTGTGCTAT TCGAATTAAC GCAATTTACT
GAGTTCGCAG GGGAAATCTT TGCGGTCAAC GCGCTGATCT GTGCAGCCCT CTATTGGCAG
CTAAAAAGCC GCTTAGAAAA AGCCCGCAGC GGCTTATTGT TAGTCTTTGC AGGAAGTTTT
GCCGGATTCG CGGCGCTGTA TTTACTCAGC CATGATTTCC TCGGCTTAGT CTTACTGCTC
GAAGCCTTAT TACTGCTATG GATTGGCACC AAGGAAGAGC TGGTTTCAGT GCGCGCCGAA
GCCTATGTAT TACTGCTGAT GGGTTTAGGA TTGAATGCGT TTAGCGTGCT AGATAGTATG
GCACTGTTAG AATCCAGCAT GTTAGATGCC TTAGCGATTT CACCTTTGTC GGCCTTTGGC
TTTTCGCTGA TAGCGCTGGC CTTAAGTTGC GCCGCCTTAG TCTTTGCCAT TCGACTATTA
ACATTCACCC ATGCGCCACT TTCTGCGTTA GAACATCAGC TTTGCAGAAT ACTAAAAGAA
CTATTAAGCG GTTTTTATGT GGCGACAATT ATCCTCGCGG CTTACCTTTT GAGCAGCGAT
TACTATCTCG CTATCTTGCC GCTGGTCAGC CTATTACTGC TGTATTTAAG CGCAAAGGAC
AAACTCGTTA TCAGCGAATT TGCCGCTTGG TTCTTACTAT TGCCACTGCT CTTTAAAGTC
GTTGAAGGCA TAACACTCGC GGACAGTTTT AGCTTTAGCG CCCAGCCGCT CATGGCAAAA
CTGGCTCGGA TTGAGTTATT TACCGCCTTG CTTTTGGCCC ATTATTGGTA TCGTCGCCAC
TATAAAGATG CGCTATTTGC CAAAGCCGCT TATAGCATGC AAATCTGCTG TTATTTGCTG
CTGCCGCTTA TTCTGCTGCC CAAAGTTATC CGCAACTATT GGGAATATAC CGCTATCGCC
CTTTGGCTGA GCACTTTTAT GAGCCTAGGT TTAGCCTATT TTGTTAAGCA TAAGAGTTTG
AACATAGAGG CCAAAATCCT CACTTGGCTA GCGGTTCTGA TGACCGCCTC GCTATGTCTT
ATTCACGCTT GGCAAGGACT CGCGGCGCTG GTTATTGGCG CCCTGTTTAT GGGCTTCACC
CTGCTTCGTT ATCGCCAATT ACCCGAGACA TGGCGCCCCT TGCTGCAGCT ACAATGGCAA
CTGAGTCCTT ATTACTTTGC ACTGGTATTA GCCGTAATCG TTTATGGTTT TAATCATTCA
GAGCTAGTCG GAATCGCGAT GACAGCGTTA GCCTTAAGTG GTTATTTTGC ATTGCTGATC
CAAAGAGGTG TAAGCAAAAG AGCTGAAGGC CAAGCCTCAC ATAGCATGAA ATTAACCCTA
GTAGCCGAAA TTCAAGCCGC AATAAAGGAA AGCTACCATC TCGCCTACGG CCTAACGTTA
GGCTTAGCCC TGTTGCCCAT CATGTTGCAT TTTGAGATCA CGCTTGGGCT TAATCGTGAT
AATGCCTCGT TTGTGTTAAT CGAGTTTTTA TCGCTGGCAC TCCTAGCAAG GCTTATCTTG
CAGCACGGCG CAGCAATACG CTTACATAGA CGTATCTTGC CATTACAAGG ACTTAAGTGG
GGTTGGCATC TGTTACTCGC CTTGAGTTAC TTCATGTGGA GTTATAGTTT TGATAGCATG
ATTGCCGCCC CACTCAGCGC GATTTTATTG GTTATCCATG GCAGTGTGTT GATGTTTATC
AGCTTAAAAC CACAAAATGC CGATATGATC CGCCTCGCCG CAGGGCTATT TATCCTATCG
ACGCTCAAGG TGCTATTACT GGATATGGCG TCCTTCGAGC TAGTGCAAAA GGTCATTGCC
TTTATGCTGA TCGGGGTTAT TTTACTTACC GTTTCTTACT TCTACCAGAA GGCGAGAAAT
CGATTGCAGC AAGATTAA
|
|---|
| Protein sequence | MPLKDDVAQL KAELAQLQSL HLSQQSSLSR QLAEFSTKLD TLSQQITTED AADTTVSMAA
GAASIAAVVP AADNAPTLTH AAHTPILESA PVAPVPAEPN PWQQNAVQGD PWQRNTKNTS
AEQVAKTEYQ AQGQQLSDEV KLQASVQVAS QFDDLLSQGL AAIMAPFGAI TEQIKSFYHH
YQAKGLGPVF LMTVAGIITL TLGFGYLLQY SINHWFSELG KALLGFASAN AIIAGGIFIR
QKRAGMADFG SGIIGLGLIL NFLCAYFIGP YFEIIPNSAS FILLLLITLA GYGLSMRLDA
KVIAVIALVG GSTAPMMLLS QSYAPLLYLP YLLLIGIGAL AQSRKLKWPL LVEITALLHI
GCIEAFSYFV PLPLTDFGGG SLLALISINA TFYLYGITGL IFTKQFTHQD KQPSNTLSHR
MLALPIALLA FVLFELTQFT EFAGEIFAVN ALICAALYWQ LKSRLEKARS GLLLVFAGSF
AGFAALYLLS HDFLGLVLLL EALLLLWIGT KEELVSVRAE AYVLLLMGLG LNAFSVLDSM
ALLESSMLDA LAISPLSAFG FSLIALALSC AALVFAIRLL TFTHAPLSAL EHQLCRILKE
LLSGFYVATI ILAAYLLSSD YYLAILPLVS LLLLYLSAKD KLVISEFAAW FLLLPLLFKV
VEGITLADSF SFSAQPLMAK LARIELFTAL LLAHYWYRRH YKDALFAKAA YSMQICCYLL
LPLILLPKVI RNYWEYTAIA LWLSTFMSLG LAYFVKHKSL NIEAKILTWL AVLMTASLCL
IHAWQGLAAL VIGALFMGFT LLRYRQLPET WRPLLQLQWQ LSPYYFALVL AVIVYGFNHS
ELVGIAMTAL ALSGYFALLI QRGVSKRAEG QASHSMKLTL VAEIQAAIKE SYHLAYGLTL
GLALLPIMLH FEITLGLNRD NASFVLIEFL SLALLARLIL QHGAAIRLHR RILPLQGLKW
GWHLLLALSY FMWSYSFDSM IAAPLSAILL VIHGSVLMFI SLKPQNADMI RLAAGLFILS
TLKVLLLDMA SFELVQKVIA FMLIGVILLT VSYFYQKARN RLQQD
|
|---|
| |