| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3371 |
|---|
| Symbol | |
|---|
| ID | 7087197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3996186 |
|---|
| End bp | 3996926 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643462257 |
|---|
| Product | Alkylated DNA repair protein-like protein |
|---|
| Protein accession | YP_002359278 |
|---|
| Protein GI | 217974527 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.647547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAGC AAGATGATGC CAAAGATAAT AATCAGCGTG ACCAGAGTGA CAATCAAGGT
GGCGGCCAAA GGGTTGACTT GTTTTCTGAA CTTGAGCCTG ACGCCGCGGC GGATCCTGAT
TTGCAGTTAA GTTTGAGCAT GGCCGAACAA GGTTCGAAAA AAACTGAGCA ACCCACACCG
CCCATCACCT TAGTGCGGGG TTATCTTAAT GCTGAGCAGC AAGCAGTGCT GATAAAAGAA
GCGCAGACTT ATCCCTTAAG TCGCCCCGAA ATCCAAGTAT TCGGTCAGTT TCACGCGATT
CCCCGCCAGC AAGTGTGGTT TGGCGATTTG GGCTGTGACT ATTTATATTC AGGACTGTTT
ATCCGCGCCT TACCTTGGCC TAAATATGCC CACAAGTTGA GGGAAAAGTT AGCGCGGGAT
TATGGCTTGG CCAGCAATGG GGTATTAGTC AATCGCTACG CAGATGGTAA AGATTGCATG
GGAGCCCACA GCGATGATGA ACCGGAAATT GCCCATGGTA GCCATATTGC TTCTATTACC
TTAGGCGCCA CGCGGGATTT TGTGCTTAAG CATAAACACA GCCAAACCAA ATACTGCATC
AGTTTGCACA GCGGCGATCT GCTGATCATG CATTGGCCCA TGCAAAACGA CTGGTTACAC
AGCTTACCTA AACGCTTGAA AGTAAAAGAG CCCCGCTGGA ACTACACCTT TAGACAACTC
ATCGTTAATT TCCATGGCTA A
|
|---|
| Protein sequence | MNKQDDAKDN NQRDQSDNQG GGQRVDLFSE LEPDAAADPD LQLSLSMAEQ GSKKTEQPTP
PITLVRGYLN AEQQAVLIKE AQTYPLSRPE IQVFGQFHAI PRQQVWFGDL GCDYLYSGLF
IRALPWPKYA HKLREKLARD YGLASNGVLV NRYADGKDCM GAHSDDEPEI AHGSHIASIT
LGATRDFVLK HKHSQTKYCI SLHSGDLLIM HWPMQNDWLH SLPKRLKVKE PRWNYTFRQL
IVNFHG
|
|---|
| |