Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3342 |
Symbol | |
ID | 7087168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3965100 |
End bp | 3966131 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462228 |
Product | periplasmic binding protein |
Protein accession | YP_002359249 |
Protein GI | 217974498 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0029736 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTTC AAGCAACTAA AATGTCATTA AAAATAGATA CTAGCGCCCT TGGCCATCCG CATAAGCCTA AGTGCGCATT TAATCCGTTA AGCCGATTTA AGCCATTAAG CAAAGTGGTA TTTATCGCCT CAGCATTTGC GGCTTTGCTA TCGTCCAGCC TCTTTAGTGC TGAGCCCAAT GCTGTACTGA GTACAAAATC TAATGCTGAA ACGAATTCCA AACATGAGAT AAGACTGGTG AGTGCGGGCA CGGGCGTCAC TGAGCTCGTG CTCGCCCTCG ATGCGGGTAA TGAGCTGGTC GCCATAGATT CCACCAGCTA TGTACCTGAC GGTTTAAGCC ATGTGGCTAA GCTTGGCTAT CACAGAATGC TCTCTGCCGA AGGCATTATC GCCCTCTCGC CAACACTCGT TGTCGGCTCG GATGTCATGG GGCCTGAGAC CACGCTCAAT GTATTAAAAC AAGCCCATAT CCAAGTTGTG CAGTTACCCG CAACGAACGA TGAGCCGCAG CTAATGAGCA ATGTGGATAC CTTAGGTCAA TTACTCAATC GCCCAGATAA CGCCATTAAG TTAAAGCAGG ACTTACATCA ACAACTGCAA AGCTTGGCGG ATAAAAAACA GCAAATAAGC GATGCTGGCG CTCAGCCAAA AATCCTCTTT ATGCTGCTAC AAGAAGGCCG TGGCGCACGG GTCGGCGGTA AAGGCACTGC CGCTGATACC ATTATCGCGC TATCAGGCGC ACAGAATATC GCCGAGTTTG ATGGCTACAA AAGTATGTCT CAGGAAGGGA TTTTGTCCTT GCAGCCCGAC ATTATCTTGC TGTCAAAGCG CAGCGATAAA CCCGCCGAGC AAACTAACGC GCAAATTGCC CAAGAACTGA TAAAAGAGAT GCCGCTAATT GCCCATACCC CCGCGGGTAA AAACGGCCAT ATTCAAATGC TGCCGCCACA AGCGCTTCTC GGCGGCTTAG GCATCAGTGC GATTAGCGCC GCCGATACGC TCGCCAGTAC ATTGCTCAAG CAAAACCAGT AA
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Protein sequence | MLFQATKMSL KIDTSALGHP HKPKCAFNPL SRFKPLSKVV FIASAFAALL SSSLFSAEPN AVLSTKSNAE TNSKHEIRLV SAGTGVTELV LALDAGNELV AIDSTSYVPD GLSHVAKLGY HRMLSAEGII ALSPTLVVGS DVMGPETTLN VLKQAHIQVV QLPATNDEPQ LMSNVDTLGQ LLNRPDNAIK LKQDLHQQLQ SLADKKQQIS DAGAQPKILF MLLQEGRGAR VGGKGTAADT IIALSGAQNI AEFDGYKSMS QEGILSLQPD IILLSKRSDK PAEQTNAQIA QELIKEMPLI AHTPAGKNGH IQMLPPQALL GGLGISAISA ADTLASTLLK QNQ
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