Gene Sbal223_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3342 
Symbol 
ID7087168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3965100 
End bp3966131 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID643462228 
Productperiplasmic binding protein 
Protein accessionYP_002359249 
Protein GI217974498 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0029736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTC AAGCAACTAA AATGTCATTA AAAATAGATA CTAGCGCCCT TGGCCATCCG 
CATAAGCCTA AGTGCGCATT TAATCCGTTA AGCCGATTTA AGCCATTAAG CAAAGTGGTA
TTTATCGCCT CAGCATTTGC GGCTTTGCTA TCGTCCAGCC TCTTTAGTGC TGAGCCCAAT
GCTGTACTGA GTACAAAATC TAATGCTGAA ACGAATTCCA AACATGAGAT AAGACTGGTG
AGTGCGGGCA CGGGCGTCAC TGAGCTCGTG CTCGCCCTCG ATGCGGGTAA TGAGCTGGTC
GCCATAGATT CCACCAGCTA TGTACCTGAC GGTTTAAGCC ATGTGGCTAA GCTTGGCTAT
CACAGAATGC TCTCTGCCGA AGGCATTATC GCCCTCTCGC CAACACTCGT TGTCGGCTCG
GATGTCATGG GGCCTGAGAC CACGCTCAAT GTATTAAAAC AAGCCCATAT CCAAGTTGTG
CAGTTACCCG CAACGAACGA TGAGCCGCAG CTAATGAGCA ATGTGGATAC CTTAGGTCAA
TTACTCAATC GCCCAGATAA CGCCATTAAG TTAAAGCAGG ACTTACATCA ACAACTGCAA
AGCTTGGCGG ATAAAAAACA GCAAATAAGC GATGCTGGCG CTCAGCCAAA AATCCTCTTT
ATGCTGCTAC AAGAAGGCCG TGGCGCACGG GTCGGCGGTA AAGGCACTGC CGCTGATACC
ATTATCGCGC TATCAGGCGC ACAGAATATC GCCGAGTTTG ATGGCTACAA AAGTATGTCT
CAGGAAGGGA TTTTGTCCTT GCAGCCCGAC ATTATCTTGC TGTCAAAGCG CAGCGATAAA
CCCGCCGAGC AAACTAACGC GCAAATTGCC CAAGAACTGA TAAAAGAGAT GCCGCTAATT
GCCCATACCC CCGCGGGTAA AAACGGCCAT ATTCAAATGC TGCCGCCACA AGCGCTTCTC
GGCGGCTTAG GCATCAGTGC GATTAGCGCC GCCGATACGC TCGCCAGTAC ATTGCTCAAG
CAAAACCAGT AA
 
Protein sequence
MLFQATKMSL KIDTSALGHP HKPKCAFNPL SRFKPLSKVV FIASAFAALL SSSLFSAEPN 
AVLSTKSNAE TNSKHEIRLV SAGTGVTELV LALDAGNELV AIDSTSYVPD GLSHVAKLGY
HRMLSAEGII ALSPTLVVGS DVMGPETTLN VLKQAHIQVV QLPATNDEPQ LMSNVDTLGQ
LLNRPDNAIK LKQDLHQQLQ SLADKKQQIS DAGAQPKILF MLLQEGRGAR VGGKGTAADT
IIALSGAQNI AEFDGYKSMS QEGILSLQPD IILLSKRSDK PAEQTNAQIA QELIKEMPLI
AHTPAGKNGH IQMLPPQALL GGLGISAISA ADTLASTLLK QNQ