| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3332 |
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| Symbol | |
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| ID | 7087158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3951418 |
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| End bp | 3952878 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643462218 |
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| Product | sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family |
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| Protein accession | YP_002359239 |
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| Protein GI | 217974488 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATG AGATTTCGGT CAATAATGAA AAATCAGTAG ATAAGCATTT CTTACCGGAA
AACCAGTTAC TGCTTAACGC TGTCGGTGAA GGGATTTATG GATTTGATTT AAGCGGTAAT
GCGGTGTTTA TCAATCCAGC GGCAGAACGC ATGACAGGTT GGAAGAATGA AGAGTTACTG
GGCAAAAATA TCCATAACTG CCATCACCAC AGCCATGCGG ATGGTAGCCA TTACCCCCAA
GAAGATTGCC CGATTTACAA CACCTTAAAG GATGGTATTA CCCGAGAAAT CACCCACGAT
GTGTTCTGGC GTAAAGATGG CAGTAGCTTC CCCGTGTATT ACAGTTCCCC CCCCGTTTAC
CGTGATAATG AACTGATTGG CGTAGTCGCG ATATTTCGTG ACATTAGTAT TCAAAAGCAA
ACAGAGCAGT CATTACGCCA AGCATTGGCG CAAGTGCAGG CGCTCTCGGA GCGACTCGCC
TCGGAGAATC ATTATCTGCA GGCTGAACTT GCTGACAAAA CGGGTGATGT GGATATTTCG
GGCGCCAGTA GCGTGATCCG CCACATGATC CAGCAATTGC ATATGGTGGC TAATACCGAC
AGTACTGTGC TCATTTGTGG TGAAAATGGC ACAGGAAAAG AGCTCGTTGC CCGTAACTTA
CATCAACTCA GTCGCCGCAA AGACAAGCCG ATGATCAGCG TCAACTGCGC CGCATTTTCG
GCATCTTTGT TAGAAAGTGA ACTTTTTGGT CACGAGAAAG GCGCATTCAC CGGTGCCACC
AGTCGCCGTA AAGGCCGCTT CGAACTTGCT CACCAAGGCA CGCTGTTCCT CGATGAAGTG
GCAGAACTCA GTTTAGAAGC CCAATCAAAA CTACTGCGGG TCATCCAAGA GCAATCCTTC
GAACGCCTCG GAGGCAGCGA AACCATTCAA GTGGATATTC GCTTGGTCGC CGCCAGTCAT
CACGACTTAC TCAAGCGGGT CGAGCAGGGA TTATTTCGGA TGGATCTCTA TTACCGCTTG
AATGTATTTC CTATTCAAGT GCCACCACTG CGCGCGAGGA TCGAAGATAT CCCCGAACTC
GTCAGCCATA TACTGCACAG CTTGAATCGT AAGTTAGGTA AAAAAATCCG CGGTGTGAGC
CAAAAAGGGC TGCAAAAGCT CATGGCTTAT ACATGGCCGG GCAATGTGCG CGAATTGCAA
AACATCCTCG AGCGCGAAGC CATTCTATCC CAAGGCGATA TTCTGCAGAT CCATGCGATG
CCGAGCAACA ACCCCTTAGC TCAAGCCCAA GGCCAAACCT TAGCAGAAGC GGAAGCCTTA
CATATAGAAC AGACCCTTAA ACGCTTAAAC TGGCGAATAT CCGGTCCACT CGGCGCGGCG
AATGTGCTAG GCGTTCCGGC AAGTACGTTA AGATCGCGGA TGAAAAAACT GGGGATCCAA
CGTCAATCGA GTGAAATATA A
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| Protein sequence | MTNEISVNNE KSVDKHFLPE NQLLLNAVGE GIYGFDLSGN AVFINPAAER MTGWKNEELL
GKNIHNCHHH SHADGSHYPQ EDCPIYNTLK DGITREITHD VFWRKDGSSF PVYYSSPPVY
RDNELIGVVA IFRDISIQKQ TEQSLRQALA QVQALSERLA SENHYLQAEL ADKTGDVDIS
GASSVIRHMI QQLHMVANTD STVLICGENG TGKELVARNL HQLSRRKDKP MISVNCAAFS
ASLLESELFG HEKGAFTGAT SRRKGRFELA HQGTLFLDEV AELSLEAQSK LLRVIQEQSF
ERLGGSETIQ VDIRLVAASH HDLLKRVEQG LFRMDLYYRL NVFPIQVPPL RARIEDIPEL
VSHILHSLNR KLGKKIRGVS QKGLQKLMAY TWPGNVRELQ NILEREAILS QGDILQIHAM
PSNNPLAQAQ GQTLAEAEAL HIEQTLKRLN WRISGPLGAA NVLGVPASTL RSRMKKLGIQ
RQSSEI
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